RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 SEPHS2Q99611 448 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 MCHR1Q99705 422 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 PIGQQ9BRB3 760 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 SHARPINQ9H0F6 387 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ANKRD19PQ9H560 264 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 YY1AP1Q9H869 796 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 UBTD1Q9HAC8 227 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM27Q9HBJ8 222 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 NRIP3Q9NQ35 241 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 ARMC1Q9NVT9 282 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 TAS2R10Q9NYW0 307 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 NDUFAF4Q9P032 175 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 LPAR3Q9UBY5 353 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 DKKL1Q9UK85 242 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 A4GNTQ9UNA3 340 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 VDAC3Q9Y277 283 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 V9GYQ6 96 aa5.68□□□□□ -1.5
DEPDC4-210ENST00000551642 hCG_2014768A0A024R1R8 64 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A087WUJ7 227 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 TRGV5A0A0B4J1U4 118 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A0B4J2E0 115 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A1B0GWA3 101 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A1B0GX12 115 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 OR2M5A3KFT3 312 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 TRAPPC13A5PLN9 417 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 CPSF4LA6NMK7 179 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 FAM166BA8MTA8 275 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 DEFB108AA8MXU0 73 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 KDM4EB2RXH2 506 aaPredicted RBP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 ANKRD65E5RJM6 399 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 hCG_2039718K7EN88 272 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 FFAR1O14842 300 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF208O43345 1280 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 CHP2O43745 196 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 OR5F1O95221 314 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 LYPD3O95274 346 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 ACTL6AO96019 429 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 THY1P04216 161 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 PNMTP11086 282 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 IGFBP5P24593 272 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 IFNA8P32881 189 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 CLK1P49759 484 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 POLR2HP52434 150 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 CDH12P55289 794 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 TPTEP56180 551 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 TAS2R41P59536 307 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 HOXC5Q00444 222 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 ST3GAL3Q11203 375 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 FOXF1Q12946 379 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 GK3PQ14409 553 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 BCL2A1Q16548 175 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 ALG10BQ5I7T1 473 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 ARHGAP11AQ6P4F7 1023 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 AAGABQ6PD74 315 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 DEF8Q6ZN54 512 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 DNM1P46Q6ZS02 220 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 PLEKHM3Q6ZWE6 761 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 TRILQ7L0X0 811 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 YRDCQ86U90 279 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 OFCC1Q8IZS5 231 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 CADM2Q8N3J6 435 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 OR14L1PQ8NHC6 308 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 NEIL3Q8TAT5 605 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 C3orf49Q96BT1 292 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 MPP4Q96JB8 637 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 PRSS27Q9BQR3 290 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF426Q9BUY5 554 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 CHID1Q9BWS9 393 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 C6orf203Q9P0P8 240 aaPredicted RBP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 RPS6KB2Q9UBS0 482 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 RIMS3Q9UJD0 308 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 OSGIN1Q9UJX0 560 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 AURKCQ9UQB9 309 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 FAM32AQ9Y421 112 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 AP4S1Q9Y587 144 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 AP4B1Q9Y6B7 739 aa5.67□□□□□ -1.5
DEPDC4-210ENST00000551642 MED12LQ86YW9 2145 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 TMED7-TICAM2A0A0A6YYA0 188 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A1W2PRQ8 180 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM89A2RUT3 159 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 HTR3EA5X5Y0 456 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 H3BNX3 289 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 J3KTA2 159 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 ADAMDEC1O15204 470 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 EFNA2O43921 213 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 FKBP6O75344 327 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 ENTPD5O75356 428 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 KRT36O76013 467 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 IGF2P01344 180 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 H1F0P07305 194 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 TMIGD3P0DMS9 266 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 FCGR1AP12314 374 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 CPN1P15169 458 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 CXCR1P25024 350 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 TACR3P29371 465 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 GCKP35557 465 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 RBM34P42696 430 aaKnown RBP5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 ERFP50548 548 aa5.66□□□□□ -1.5
DEPDC4-210ENST00000551642 ATP5J2P56134 94 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms