RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 ZNRF4Q8WWF5 429 aa18.58■□□□□ 0.56
VPS29-206ENST00000549578 CYGBQ8WWM9 190 aa18.58■□□□□ 0.56
VPS29-206ENST00000549578 PTP4A1Q93096 173 aa18.58■□□□□ 0.56
VPS29-206ENST00000549578 IL4I1Q96RQ9 567 aa18.58■□□□□ 0.56
VPS29-206ENST00000549578 VCX3BQ9H321 246 aa18.58■□□□□ 0.56
VPS29-206ENST00000549578 SEC61A2Q9H9S3 476 aa18.58■□□□□ 0.56
VPS29-206ENST00000549578 FKBP7Q9Y680 259 aa18.58■□□□□ 0.56
VPS29-206ENST00000549578 UTP20O75691 2785 aaKnown RBP18.57■□□□□ 0.56
VPS29-206ENST00000549578 A0A1W2PR80 420 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 TLX2O43763 284 aaPredicted RBP18.57■□□□□ 0.56
VPS29-206ENST00000549578 SPI1P17947 270 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 CENPAP49450 140 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 SLC25A1P53007 311 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 CDC42P60953 191 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 EFNB1P98172 346 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 TBRG1Q3YBR2 411 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 OTPQ5XKR4 325 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 ZNF627Q7L945 461 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 CXXC5Q7LFL8 322 aaKnown RBP18.57■□□□□ 0.56
VPS29-206ENST00000549578 PROKR2Q8NFJ6 384 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 BBS1Q8NFJ9 593 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 OR2T4Q8NH00 348 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 UBE2FQ969M7 185 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 RACGAP1Q9H0H5 632 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 IMPAD1Q9NX62 359 aa18.57■□□□□ 0.56
VPS29-206ENST00000549578 OR5H1A6NKK0 313 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 SLC16A6O15403 523 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 MRPS34P82930 218 aaKnown RBP18.56■□□□□ 0.56
VPS29-206ENST00000549578 BCDIN3DQ7Z5W3 292 aaKnown RBP18.56■□□□□ 0.56
VPS29-206ENST00000549578 GLB1L2Q8IW92 636 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 SLC22A24Q8N4F4 322 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 DHRSXQ8N5I4 330 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 LINC01560Q8TB33 94 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 TMEM163Q8TC26 289 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 NABP1Q96AH0 204 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 ADI1Q9BV57 179 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 OR51V1Q9H2C8 321 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 SLC17A5Q9NRA2 495 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 USP9YO00507 2555 aaPredicted RBP18.56■□□□□ 0.56
VPS29-206ENST00000549578 DOPEY2Q9Y3R5 2298 aa18.56■□□□□ 0.56
VPS29-206ENST00000549578 MPZL1O95297 269 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 CLIC3O95833 236 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 SCG5P05408 212 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 LAP3P28838 519 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 TUBA1BP68363 451 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 TUBA4AP68366 448 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 SGCAQ16586 387 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 FOXL2NBQ6ZUU3 175 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 TUBA1AQ71U36 451 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 C17orf78Q8N4C9 275 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 WDR31Q8NA23 367 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 OR52N5Q8NH56 324 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 WFIKKN1Q96NZ8 548 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 SH3GL3Q99963 347 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 ICE1Q9Y2F5 2266 aa18.55■□□□□ 0.56
VPS29-206ENST00000549578 OR8G3PP0DMU2 310 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 IGFBP2P18065 325 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 HOXC12P31275 282 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 ADARB1P78563 741 aaKnown RBP18.54■□□□□ 0.56
VPS29-206ENST00000549578 KEAP1Q14145 624 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 TAB1Q15750 504 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 TIMM23BQ5SRD1 257 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 ALKBH2Q6NS38 261 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 LYPD4Q6UWN0 246 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 IZUMO2Q6UXV1 221 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.54■□□□□ 0.56
VPS29-206ENST00000549578 SKA3Q8IX90 412 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 LRRC18Q8N456 261 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 ZC3HAV1LQ96H79 300 aaKnown RBP18.54■□□□□ 0.56
VPS29-206ENST00000549578 BOD1Q96IK1 185 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 MED18Q9BUE0 208 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 OR10A4Q9H209 315 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 EMC7Q9NPA0 242 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 POLE4Q9NR33 117 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 ZNF226Q9NYT6 803 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 PRR14LQ5THK1 2151 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 ANKHD1Q8IWZ3 2542 aaKnown RBP18.54■□□□□ 0.56
VPS29-206ENST00000549578 ZNF503-AS2A6NEH8 195 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 TUBAL3A6NHL2 446 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 GAAP10253 952 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 NPR2P20594 1047 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 VHLP40337 213 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 GUCA1AP43080 201 aaPredicted RBP18.54■□□□□ 0.56
VPS29-206ENST00000549578 CAPZA2P47755 286 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 GLO1Q04760 184 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 KLHL12Q53G59 568 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 TTC23Q5W5X9 447 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 UGT2A3Q6UWM9 527 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 OR8J1Q8NGP2 316 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 OR6K6Q8NGW6 343 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 SIAEQ9HAT2 523 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 RASSF1Q9NS23 344 aa18.54■□□□□ 0.56
VPS29-206ENST00000549578 SH3D21A4FU49 640 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 H0YJX3 145 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 FARS2O95363 451 aaKnown RBP18.53■□□□□ 0.56
VPS29-206ENST00000549578 HLA-HP01893 362 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 HLA-DQA2P01906 255 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 THBDP07204 575 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 PATE4P0C8F1 98 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 PPP3CBP16298 524 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms