RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 MUL1Q969V5 352 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC25A44Q96H78 314 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 TMEM80Q96HE8 168 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 ADAD1Q96M93 576 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 GPR137Q96N19 417 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 FOXN4Q96NZ1 517 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 OR5M11Q96RB7 305 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 RACGAP1Q9H0H5 632 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 MARCH7Q9H992 704 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 MRPL22Q9NWU5 206 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 PAQR5Q9NXK6 330 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 CLCF1Q9UBD9 225 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 FOXD3Q9UJU5 478 aaPredicted RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 MCTS1Q9ULC4 181 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 COPS3Q9UNS2 423 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 MOKQ9UQ07 419 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 LSM2Q9Y333 95 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 SNX5Q9Y5X3 404 aa7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 INTS1Q8N201 2190 aaKnown RBP7.17□□□□□ -1.26
DEPDC4-207ENST00000549249 IRGMA1A4Y4 181 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 A6NHS1 94 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 C12orf71A8MTZ7 269 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 PRR32B1ATL7 298 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 AHCYL1O43865 530 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 INMTO95050 263 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 MPZL1O95297 269 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 SCG5P05408 212 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 LIMS3P0CW19 117 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 LIMS4P0CW20 117 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 GAAP10253 952 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 COL8A1P27658 744 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 DCKP27707 260 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 RPL5P46777 297 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF133P52736 654 aaPredicted RBP7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 HCCSP53701 268 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 NR1H2P55055 460 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 CLRN1P58418 232 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 LY6DQ14210 128 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 RAB39AQ14964 217 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 OR2G6Q5TZ20 316 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 UBE2UQ5VVX9 321 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 FOXB2Q5VYV0 432 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 RNLSQ5VYX0 342 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 LRFN4Q6PJG9 635 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 PCSK4Q6UW60 755 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 FAM180AQ6UWF9 173 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 LINGO2Q7L985 606 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 HDDC2Q7Z4H3 204 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 LHFPL3Q86UP9 236 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 C20orf196Q8IYI0 205 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 CISD2Q8N5K1 135 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF485Q8NCK3 441 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 OR5M9Q8NGP3 310 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 MCHR2Q969V1 340 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 TMEM45BQ96B21 275 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 SARAFQ96BY9 339 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 CNN2Q99439 309 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 TBX5Q99593 518 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 RERGLQ9H628 205 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 WDR76Q9H967 626 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 GLTPQ9NZD2 209 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 CLEC4AQ9UMR7 237 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 RCE1Q9Y256 329 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 COA3Q9Y2R0 106 aaPredicted RBP7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 KLHDC2Q9Y2U9 406 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 EXOSC1Q9Y3B2 195 aaKnown RBP7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF175Q9Y473 711 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 UGT2A1Q9Y4X1 527 aa7.16□□□□□ -1.26
DEPDC4-207ENST00000549249 SETXQ7Z333 2677 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 A0A1W2PQL4 384 aaPredicted RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 OR14I1A6ND48 311 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF726A6NNF4 738 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF724A8MTY0 619 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 ZNF99A8MXY4 864 aaPredicted RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 CENPBD1B2RD01 187 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 KHDRBS3O75525 346 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 UPK3AO75631 287 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 QDPRP09417 244 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 CRABP1P29762 137 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 RPS27P42677 84 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 CSNK1A1P48729 337 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 GALEQ14376 348 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 MEP1BQ16820 701 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 ACSF3Q4G176 576 aaPredicted RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 THEM4Q5T1C6 240 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 C10orf128Q5T292 105 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SYT6Q5T7P8 510 aaPredicted RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SEM1Q6ZVN7 128 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 CHMP1BQ7LBR1 199 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 AAED1Q7RTV5 226 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC16A9Q7RTY1 509 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 NUFIP2Q7Z417 695 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 CDC20BQ86Y33 519 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 ERI1Q8IV48 349 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 TUSC5Q8IXB3 177 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC35F2Q8IXU6 374 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms