RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	ZNF84	P51523	738 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	ST3GAL4	Q11206	333 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	STK11	Q15831	433 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	LYPD4	Q6UWN0	246 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	TFAP2E	Q6VUC0	442 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZNF511	Q8NB15	262 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	NAXE	Q8NCW5	288 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	SLC26A10	Q8NG04	563 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR4F15	Q8NGB8	312 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR51G2	Q8NGK0	314 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	OR52I1	Q8NGK6	324 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	SGCD	Q92629	289 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	MYDGF	Q969H8	173 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	FOXN4	Q96NZ1	517 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	BBC3	Q96PG8	261 aa	Predicted RBP	10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	ALKBH3	Q96Q83	286 aa	Predicted RBP	10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	DMRTA2	Q96SC8	542 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	VKORC1	Q9BQB6	163 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	ADGRL4	Q9HBW9	690 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	CRLF2	Q9HC73	371 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	GPR35	Q9HC97	309 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	FGF20	Q9NP95	211 aa	Predicted RBP	10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	CCNB1IP1	Q9NPC3	277 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	MALT1	Q9UDY8	824 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	SH3BGRL2	Q9UJC5	107 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	DOPEY1	Q5JWR5	2465 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	PLCE1	Q9P212	2302 aa		10.79	□□□□□ -0.68
ERBB3-208	ENST00000549205	TRGV8	A0A0C4DH27	118 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205		A0A1W2PPL8	197 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	MAGEA13P	A6NCF6	341 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	TVP23A	A6NH52	213 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZNF587B	E7ETH6	402 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	RPL36A-HNRNPH2	H7BZ11	118 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205		J3QRE1	110 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	RGS10	O43665	173 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	FADS2	O95864	444 aa	Known RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	HLA-DQA2	P01906	255 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	TF	P02787	698 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	HRG	P04196	525 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	CDK1	P06493	297 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	STS	P08842	583 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	HTR1A	P08908	422 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	MRPL3	P09001	348 aa	Known RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	SBK2	P0C263	348 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	CTSS	P25774	331 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	DCK	P27707	260 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	ATP6V1E1	P36543	226 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	NAA10	P41227	235 aa	Predicted RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	CDH15	P55291	814 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	ROR2	Q01974	943 aa	Known RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	HSF2	Q03933	536 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	PIGF	Q07326	219 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	PMPCA	Q10713	525 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	CEACAM16	Q2WEN9	425 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	VWA1	Q6PCB0	445 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZNF773	Q6PK81	442 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	FOXL2NB	Q6ZUU3	175 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	SHF	Q7M4L6	423 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	BTLA	Q7Z6A9	289 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	ERI1	Q8IV48	349 aa	Known RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	TIGD4	Q8IY51	512 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	STX19	Q8N4C7	294 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	ZNF837	Q96EG3	531 aa	Predicted RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	TMEM80	Q96HE8	168 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	SIGLEC11	Q96RL6	698 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	INTS14	Q96SY0	518 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	SFXN3	Q9BWM7	321 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	RBM24	Q9BX46	236 aa	Known RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	PLSCR4	Q9NRQ2	329 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	MRPL22	Q9NWU5	206 aa	Known RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	ERVK-18	Q9QC07	812 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	UPB1	Q9UBR1	384 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	PRSS50	Q9UI38	385 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	DIMT1	Q9UNQ2	313 aa	Known RBP	10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	OSGIN2	Q9Y236	505 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	PCDHGB1	Q9Y5G3	927 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	COMMD3-BMI1	R4GMX3	469 aa		10.78	□□□□□ -0.68
ERBB3-208	ENST00000549205	HSPB2	A8KAH6	182 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	SELENOF	O60613	162 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	MRPS14	O60783	128 aa	Known RBP	10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	MPZL1	O95297	269 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	CNOT4	O95628	575 aa	Known RBP	10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	RAB36	O95755	333 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	CGA	P01215	116 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	IGHA1	P01876	353 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	ADRA2A	P08913	450 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	CD8B	P10966	210 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	CDA	P32320	146 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	GUCA1A	P43080	201 aa	Predicted RBP	10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	MRPS34	P82930	218 aa	Known RBP	10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	MVK	Q03426	396 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	MRPL49	Q13405	166 aa	Known RBP	10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	HSPB2	Q16082	182 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	KCNMB1	Q16558	191 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	FBXW9	Q5XUX1	488 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	TMEM211	Q6ICI0	200 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	SLC16A9	Q7RTY1	509 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	PRSS48	Q7RTY5	328 aa		10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.77	□□□□□ -0.69
ERBB3-208	ENST00000549205	SLC35F2	Q8IXU6	374 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms