RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SRP9P49458 86 aaKnown RBP10.68□□□□□ -0.7
CCDC38-202ENST00000546386 PRKXP51817 358 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 SUCLG1P53597 346 aaKnown RBP10.68□□□□□ -0.7
CCDC38-202ENST00000546386 CDONQ4KMG0 1287 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 CEP78Q5JTW2 689 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 PHYHD1Q5SRE7 291 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 SLC16A9Q7RTY1 509 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 NRARPQ7Z6K4 114 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 NAA40Q86UY6 237 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 ST8SIA1Q92185 356 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 SRXN1Q9BYN0 137 aa10.68□□□□□ -0.7
CCDC38-202ENST00000546386 NXF2Q9GZY0 626 aaKnown RBP10.68□□□□□ -0.7
CCDC38-202ENST00000546386 ROS1P08922 2347 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 IGLV1-36A0A0B4J1U3 117 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 C5orf63A6NC05 138 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 A8MV72 311 aaPredicted RBP10.67□□□□□ -0.7
CCDC38-202ENST00000546386 RER1O15258 196 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 LANCL1O43813 399 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 P04436 131 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 KRT8P05787 483 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 HNRNPCP07910 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF43P17038 809 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ATF1P18846 271 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 WT1P19544 449 aaPredicted RBP10.67□□□□□ -0.7
CCDC38-202ENST00000546386 GDF1P27539 372 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 SELENOPP49908 381 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ACTC1P68032 377 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ACTA1P68133 377 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 LCN1P1Q5VSP4 162 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 SFXN4Q6P4A7 337 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 Q6ZNX1 250 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 KRT77Q7Z794 578 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 BPHLQ86WA6 291 aaPredicted RBP10.67□□□□□ -0.7
CCDC38-202ENST00000546386 CROCCP3Q8IVE0 287 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 POMGNT2Q8NAT1 580 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 LIPHQ8WWY8 451 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 POU2F3Q9UKI9 436 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ICE1Q9Y2F5 2266 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 SVEP1Q4LDE5 3571 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ONECUT2O95948 504 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 MT-ATP6P00846 226 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 LIFP15018 202 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 FGF9P31371 208 aaPredicted RBP10.67□□□□□ -0.7
CCDC38-202ENST00000546386 CYB561P49447 251 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 CLRN1P58418 232 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 RAB15P59190 212 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 SSPNQ14714 243 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 WDR38Q5JTN6 314 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 DDI2Q5TDH0 399 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 TIGD3Q6B0B8 471 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 GDPD3Q7L5L3 318 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 CDC20BQ86Y33 519 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 GPALPP1Q8IXQ4 340 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF454Q8N9F8 522 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 OR5AK2Q8NH90 309 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 ASB10Q8WXI3 467 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 TMEM106AQ96A25 262 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 COX4I2Q96KJ9 171 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 SPACA5Q96QH8 159 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 MRPL39Q9NYK5 338 aaKnown RBP10.67□□□□□ -0.7
CCDC38-202ENST00000546386 POLR1DQ9Y2S0 133 aa10.67□□□□□ -0.7
CCDC38-202ENST00000546386 COL27A1Q8IZC6 1860 aaPredicted RBP10.66□□□□□ -0.7
CCDC38-202ENST00000546386 GLO1Q04760 184 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 SGCAQ16586 387 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 DCAF10Q5QP82 559 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 UEVLDQ8IX04 471 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 PLPP7Q8NBV4 271 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 MFSD8Q8NHS3 518 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 OTOSQ8NHW6 89 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 M1APQ8TC57 530 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 PAQR8Q8TEZ7 354 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 MAP6Q96JE9 813 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 MRGPRX4Q96LA9 322 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 LRFN5Q96NI6 719 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 GFI1Q99684 422 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 CRNNQ9UBG3 495 aaPredicted RBP10.66□□□□□ -0.7
CCDC38-202ENST00000546386 ASH2LQ9UBL3 628 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 LRBAP50851 2863 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 IDH3BO43837 385 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 QDPRP09417 244 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF883P0CG24 379 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 SRMP19623 302 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 MYL9P24844 172 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 ACTA2P62736 377 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 ACTG2P63267 376 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 PMP22Q01453 160 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 POU4F2Q12837 409 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 GDPGP1Q6ZNW5 385 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 FAM220AQ7Z4H9 259 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 MISPQ8IVT2 679 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 OR2G2Q8NGZ5 317 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 ZNF671Q8TAW3 534 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 TRMT10AQ8TBZ6 339 aaKnown RBP10.66□□□□□ -0.7
CCDC38-202ENST00000546386 ABHD3Q8WU67 409 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 TSEN15Q8WW01 171 aaKnown RBP10.66□□□□□ -0.7
CCDC38-202ENST00000546386 KLHL15Q96M94 604 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 WACQ9BTA9 647 aa10.66□□□□□ -0.7
CCDC38-202ENST00000546386 RBM24Q9BX46 236 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms