RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MTCP1P56278 107 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CAV3P56539 151 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 SSTP61278 116 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 SELENOWP63302 87 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 IKZF1Q13422 519 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 GPR50Q13585 617 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 OR1C1Q15619 314 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PAGE3Q5JUK9 113 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TMEM88Q6PEY1 159 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF322Q6U7Q0 402 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CLRN3Q8NCR9 226 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 OR2T35Q8NGX2 323 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 BAHD1Q8TBE0 780 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PRRC1Q96M27 445 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 LINC00052Q96N35 136 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 RDH12Q96NR8 316 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 RHNO1Q9BSD3 238 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 SPNS1Q9H2V7 528 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 OR52D1Q9H346 318 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CD300AQ9UGN4 299 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 MCRIP1C9JLW8 97 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 E9PI62 339 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 H0YIG0 161 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF195O14628 629 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 OR2J2O76002 312 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CNIH1O95406 144 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 LY86O95711 162 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 MT-CO2P00403 227 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 OSMP13725 252 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 LCN1P31025 176 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 LIPAP38571 399 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TSFMP43897 325 aaKnown RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CLDN15P56746 228 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TP53I3Q53FA7 332 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ELP2Q6IA86 826 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 LCN8Q6JVE9 175 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 FAM199XQ6PEV8 388 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ALKAL2Q6UX46 152 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PTRH1Q86Y79 214 aaKnown RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 LAX1Q8IWV1 398 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 WDSUB1Q8N9V3 476 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 OR5M1Q8NGP8 315 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 GSX2Q9BZM3 304 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 SDR39U1Q9NRG7 319 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 EXTL2Q9UBQ6 330 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PCYT1BQ9Y5K3 369 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CREBBPQ92793 2442 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 LRRTM2O43300 516 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ALPLP05186 524 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 GYPBP06028 91 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 CD22P20273 847 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 PCP4P48539 62 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ART1P52961 327 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 HNRNPA0Q13151 305 aaKnown RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 VEZF1Q14119 521 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 FZD2Q14332 565 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 GLYR1Q49A26 553 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TRILQ7L0X0 811 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF582Q96NG8 517 aaPredicted RBP7.87□□□□□ -1.15
CLIP1-218ENST00000545889 DAPP1Q9UN19 280 aa7.87□□□□□ -1.15
CLIP1-218ENST00000545889 TRAV18A0A075B6X5 111 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 OIP5O43482 229 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 SOD1P00441 154 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 KNG1P01042 644 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 EPHA1P21709 976 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 GRINAQ7Z429 371 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 SLC35F3Q8IY50 421 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 GALNT16Q8N428 558 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 TMEM151AQ8N4L1 468 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 OR4M2Q8NGB6 313 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 NETO1Q8TDF5 533 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 LIPHQ8WWY8 451 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 KATNB1Q9BVA0 655 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 SEMA4CQ9C0C4 833 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 LYRM4Q9HD34 91 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 SLC22A11Q9NSA0 550 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 SLAMF8Q9P0V8 285 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 B3GALT1Q9Y5Z6 326 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 NYNRINQ9P2P1 1898 aaKnown RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 TCF20Q9UGU0 1960 aaKnown RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 CD8B2A6NJW9 211 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 KRBOX1C9JBD0 128 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 ARNTLO00327 626 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 HRO43593 1189 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 PTP4A3O75365 173 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 CD8BP10966 210 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 MSR1P21757 451 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 RRAS2P62070 204 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 HBA1P69905 142 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 BAK1Q16611 211 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 LRRC37A5PQ49AS3 106 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 ENTPD8Q5MY95 495 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 NDUFAF7Q7L592 441 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF417Q8TAU3 575 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 ABHD4Q8TB40 342 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 COX14Q96I36 57 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF587Q96SQ5 575 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 TREX2Q9BQ50 279 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms