RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ACADSP16219 412 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 FPR2P25090 351 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 TUBA1BP68363 451 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 TUBA4AP68366 448 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 NAAAQ02083 359 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 MVKQ03426 396 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 CHRNB3Q05901 458 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 NPRL3Q12980 569 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 GSG1Q2KHT4 349 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 PGGHGQ32M88 737 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 TMPRSS11FQ6ZWK6 438 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 MBOAT2Q6ZWT7 520 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 TUBA1AQ71U36 451 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF627Q7L945 461 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 YTHDF3Q7Z739 585 aaKnown RBP6.41□□□□□ -1.38
CPSF7-224ENST00000544990 OAFQ86UD1 273 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 DTX2Q86UW9 622 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 MUC15Q8N387 334 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 WFDC11Q8NEX6 87 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 OR4F15Q8NGB8 312 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 MOSPD2Q8NHP6 518 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 FNDC8Q8TC99 324 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 ASB10Q8WXI3 467 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 BDH2Q9BUT1 245 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 TRAF4Q9BUZ4 470 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-224ENST00000544990 TXNIPQ9H3M7 391 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 MAN2C1Q9NTJ4 1040 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 FAM53CQ9NYF3 392 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 NDUFAF4Q9P032 175 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 FBXL7Q9UJT9 491 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 FBXL3Q9UKT7 428 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 MOKQ9UQ07 419 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 AURKCQ9UQB9 309 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 PMF1-BGLAPU3KQ54 211 aa6.41□□□□□ -1.38
CPSF7-224ENST00000544990 A0A1W2PRQ8 180 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 A6NIZ1 184 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 ATP6V1G2-DDX39BF2Z307 99 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 hCG_2039718K7EN88 272 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 ARPC2O15144 300 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 TRMUO75648 421 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 SEC14L2O76054 403 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 GADD45GO95257 159 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 STAMBPO95630 424 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RAB36O95755 333 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 IGLV1-44P01699 117 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 FABP3P05413 133 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 CECR9P0C854 216 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 OR8G3PP0DMU2 310 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 B4GALT1P15291 398 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 MAKP20794 623 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 MSX2P35548 267 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RPL4P36578 427 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 CDKN1AP38936 164 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 GUCA1AP43080 201 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 IDH3GP51553 393 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 CTXN1P60606 82 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RAP1BP61224 184 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RPL27P61353 136 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RAB1AP62820 205 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RAP1AP62834 184 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 VLDLRP98155 873 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 PIGFQ07326 219 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 SPOCK1Q08629 439 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 CD47Q08722 323 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 DGCR6Q14129 220 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RAB35Q15286 201 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 ETFDHQ16134 617 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 HIST3H3Q16695 136 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 NRN1LQ496H8 165 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 ZBED5Q49AG3 693 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 MTX3Q5HYI7 312 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 FGD3Q5JSP0 725 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 FAM205BPQ63HN1 556 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 PODNL1Q6PEZ8 512 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 TBPL2Q6SJ96 375 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 TSEN54Q7Z6J9 526 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 DPPA2Q7Z7J5 298 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 MDP1Q86V88 176 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 Q8N1Y9 231 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 SLC22A24Q8N4F4 322 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 SYT14Q8NB59 555 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RBM15BQ8NDT2 890 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 NOXO1Q8NFA2 376 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 OR51A7Q8NH64 312 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 SLC7A13Q8TCU3 470 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 BCAS4Q8TDM0 211 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 POP5Q969H6 163 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 MCHR2Q969V1 340 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 C7orf34Q96L11 122 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 Q96MF0 132 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RBP7Q96R05 134 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 TNFRSF13CQ96RJ3 184 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF347Q96SE7 839 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 MRPL13Q9BYD1 178 aaKnown RBP6.4□□□□□ -1.38
CPSF7-224ENST00000544990 C1orf21Q9H246 121 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 KCNN2Q9H2S1 579 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 MUC13Q9H3R2 512 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 RNF121Q9H920 327 aa6.4□□□□□ -1.38
CPSF7-224ENST00000544990 BARX1Q9HBU1 254 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms