RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 IGFBP5P24593 272 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 CSNK1A1P48729 337 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 CLRN1P58418 232 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 LCN6P62502 163 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 MYBPC1Q00872 1141 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 PPA1Q15181 289 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 TRIP10Q15642 601 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 MESTQ5EB52 335 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 C9orf135Q5VTT2 229 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 LPCAT4Q643R3 524 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 KDM4DQ6B0I6 523 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 LINGO2Q7L985 606 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 CXXC5Q7LFL8 322 aaKnown RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 FAM122BQ7Z309 247 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 C20orf196Q8IYI0 205 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 GPR137CQ8N3F9 429 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 CBR4Q8N4T8 237 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 IQCF1Q8N6M8 205 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 CLDN22Q8N7P3 220 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 SYT14Q8NB59 555 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 OR6N1Q8NGY5 312 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 OR4Q3Q8NH05 313 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 ZNF519Q8TB69 540 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 TEX47Q8TBZ9 253 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 MAGEE2Q8TD90 523 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 HDAC2Q92769 488 aaKnown RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 TMEM54Q969K7 222 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 ZNF566Q969W8 418 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 RASD2Q96D21 266 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 TRMT61AQ96FX7 289 aaKnown RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 SLC25A44Q96H78 314 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 SLC29A1Q99808 456 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 OSBPL10Q9BXB5 764 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 REG4Q9BYZ8 158 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 HEATR1Q9H583 2144 aaKnown RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 DCLRE1BQ9H816 532 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 TMEFF2Q9UIK5 374 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 GDF2Q9UK05 429 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-206ENST00000544964 POFUT2Q9Y2G5 429 aa10.89□□□□□ -0.67
ACTN1-206ENST00000544964 A0A096LNT2 108 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 NPIPB13A6NJU9 1138 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 NPIPB4C9JG80 1138 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 BHLHE40O14503 412 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 IMPA2O14732 288 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 IGHG1P01857 330 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 PGA4P0DJD7 388 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 PGA3P0DJD8 388 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 SDHAP31040 664 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 RPS6KA3P51812 740 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 CDH11P55287 796 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 KRR1Q13601 381 aaKnown RBP10.88□□□□□ -0.67
ACTN1-206ENST00000544964 DAG1Q14118 895 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 LRRC36Q1X8D7 754 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 TIMM23BQ5SRD1 257 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 SLC35F1Q5T1Q4 408 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.88□□□□□ -0.674e-7■■■□□ 19.2
ACTN1-206ENST00000544964 ZNF433Q8N7K0 673 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-206ENST00000544964 ARIH2OSQ8N7S6 290 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 POMGNT2Q8NAT1 580 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 NOXO1Q8NFA2 376 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 DNAJC9Q8WXX5 260 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 EME1Q96AY2 570 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 RBM4BQ9BQ04 359 aaKnown RBP10.88□□□□□ -0.67
ACTN1-206ENST00000544964 C9orf16Q9BUW7 83 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 RBM4Q9BWF3 364 aaKnown RBP10.88□□□□□ -0.67
ACTN1-206ENST00000544964 MRPL13Q9BYD1 178 aaKnown RBP10.88□□□□□ -0.67
ACTN1-206ENST00000544964 LINC00470Q9BZP3 86 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 GRIP2Q9C0E4 1043 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 GPR35Q9HC97 309 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 ASB6Q9NWX5 421 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 STX18Q9P2W9 335 aaKnown RBP10.88□□□□□ -0.67
ACTN1-206ENST00000544964 MALT1Q9UDY8 824 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 RRP15Q9Y3B9 282 aaKnown RBP10.88□□□□□ -0.67
ACTN1-206ENST00000544964 SVEP1Q4LDE5 3571 aa10.88□□□□□ -0.67
ACTN1-206ENST00000544964 A6NIZ1 184 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 OR6C65A6NJZ3 312 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 ZNF587BE7ETH6 402 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 XKRYO14609 159 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 ABCD4O14678 606 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 ARPC3O15145 178 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 TXNDC12O95881 172 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 ALPLP05186 524 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 ITGA5P08648 1049 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 HIST1H1CP16403 213 aaKnown RBP10.87□□□□□ -0.67
ACTN1-206ENST00000544964 CDH2P19022 906 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-206ENST00000544964 PEX2P28328 305 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 NOS3P29474 1203 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 ALDH3A2P51648 485 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 CRISP1P54107 249 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 RAP1BP61224 184 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 RAP1AP62834 184 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 ROR2Q01974 943 aaKnown RBP10.87□□□□□ -0.67
ACTN1-206ENST00000544964 FMODQ06828 376 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 CD47Q08722 323 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 GINS1Q14691 196 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 TMEM236Q5W0B7 351 aa10.87□□□□□ -0.67
ACTN1-206ENST00000544964 FAM205BPQ63HN1 556 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms