RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 NKIRAS2Q9NYR9 191 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 ING4Q9UNL4 249 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 COA3Q9Y2R0 106 aaPredicted RBP16.19■□□□□ 0.18
VIM-209ENST00000544301 EXPH5Q8NEV8 1989 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 TMEM200CA6NKL6 621 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 ACOT7O00154 380 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 LDOC1O95751 146 aaPredicted RBP16.19■□□□□ 0.18
VIM-209ENST00000544301 WNT11O96014 354 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 ANXA3P12429 323 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 PNLIPP16233 465 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 PSMB1P20618 241 aaKnown RBP16.19■□□□□ 0.18
VIM-209ENST00000544301 CRABP1P29762 137 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 CCKBRP32239 447 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 SQSTM1Q13501 440 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 EIF2B1Q14232 305 aaKnown RBP16.19■□□□□ 0.18
VIM-209ENST00000544301 ELFN2Q5R3F8 820 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 KCTD18Q6PI47 426 aaPredicted RBP16.19■□□□□ 0.18
VIM-209ENST00000544301 GLB1L2Q8IW92 636 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 ZNF248Q8NDW4 579 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 ARL5BQ96KC2 179 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 ZFP64Q9NPA5 681 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 MED11Q9P086 117 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 GTF2A1LQ9UNN4 478 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 PPIEQ9UNP9 301 aaKnown RBP16.19■□□□□ 0.18
VIM-209ENST00000544301 FLVCR2Q9UPI3 526 aa16.19■□□□□ 0.18
VIM-209ENST00000544301 CACNA1CQ13936 2221 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 LY6G6EA0A0G2JKS1 128 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 TRBV11-1A0A0K0K1C0 115 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 RAD1O60671 282 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 PEX14O75381 377 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 SCRG1O75711 98 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 GLSO94925 669 aaPredicted RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 MPZL1O95297 269 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 CFPP27918 469 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 EPHA8P29322 1005 aaPredicted RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 APOBEC1P41238 236 aaKnown RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 GLO1Q04760 184 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 MFGE8Q08431 387 aaPredicted RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 ZP4Q12836 540 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 OR7E24Q6IFN5 339 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 PAPD4Q6PIY7 484 aaKnown RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 ARSKQ6UWY0 536 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 MDGA2Q7Z553 956 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 FGD2Q7Z6J4 655 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 C15orf40Q8WUR7 153 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 PMEPA1Q969W9 287 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 WDR77Q9BQA1 342 aaPredicted RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 BEX1Q9HBH7 125 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 U3KQA8 63 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 A0A1W2PQM1 296 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 TPPPO94811 219 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 SULT1A3P0DMM9 295 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 SULT1A4P0DMN0 295 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 RIDAP52758 137 aaKnown RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 SUMO3P55854 103 aaPredicted RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 CCL7P80098 99 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 DCDP81605 110 aaKnown RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 GALK2Q01415 458 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 NR0B2Q15466 257 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 OR7A5Q15622 319 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 OLFML2AQ68BL7 652 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 DNM1P46Q6ZS02 220 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 CREB3L2Q70SY1 520 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 CDH24Q86UP0 819 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 ZNF454Q8N9F8 522 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 MFSD8Q8NHS3 518 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 ASB10Q8WXI3 467 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 DACT3Q96B18 629 aaPredicted RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 RANBP3Q9H6Z4 567 aaPredicted RBP16.18■□□□□ 0.18
VIM-209ENST00000544301 LRP12Q9Y561 859 aa16.18■□□□□ 0.18
VIM-209ENST00000544301 ARPC4-TTLL3A0A0A6YYG9 625 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 A6NIZ1 184 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 XRCC3O43542 346 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 HPXP02790 462 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 EMP2P54851 167 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 DLX5P56178 289 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 RAP1BP61224 184 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 RAP1AP62834 184 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 ASPHD2Q6ICH7 369 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 H1FNTQ75WM6 255 aaPredicted RBP16.17■□□□□ 0.18
VIM-209ENST00000544301 CATSPERDQ86XM0 798 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 WDFY1Q8IWB7 410 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 OR51D1Q8NGF3 324 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 DUSP23Q9BVJ7 150 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 VDAC3Q9Y277 283 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 HRH3Q9Y5N1 445 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 CACNA1EQ15878 2313 aa16.17■□□□□ 0.18
VIM-209ENST00000544301 MEIKINA0A087WXM9 373 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 ANKRD34BA5PLL1 514 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 SSNA1O43805 119 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 IFNGR1P15260 489 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 DCTDP32321 178 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 PTGS2P35354 604 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 MFSD13AQ14CX5 517 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 NDUFAF7Q7L592 441 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 OR52N5Q8NH56 324 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 RNF138Q8WVD3 245 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 OR10A4Q9H209 315 aa16.16■□□□□ 0.18
VIM-209ENST00000544301 EMC3Q9P0I2 261 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms