RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	AK6	Q9Y3D8	172 aa	Known RBP	13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	CACNA1H	O95180	2353 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	PMS2P1	A4D2B8	440 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	TOX3	O15405	576 aa	Predicted RBP	13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	FMO6P	O60774	539 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	CTNS	O60931	367 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	SC5D	O75845	299 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	UBL3	O95164	117 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	RPS27	P42677	84 aa	Known RBP	13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	POU3F4	P49335	361 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	CD226	Q15762	336 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	CBLN3	Q6UW01	205 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	OR1M1	Q8NGA1	313 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	PRTFDC1	Q9NRG1	225 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	GNG8	Q9UK08	70 aa		13.58	□□□□□ -0.24
CHFR-223	ENST00000544268	FREM2	Q5SZK8	3169 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	TRABD2B	A6NFA1	517 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	ITGA10	O75578	1167 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	OR2A4	O95047	310 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	FABP1	P07148	127 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	RPL4	P36578	427 aa	Known RBP	13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	FOXL2	P58012	376 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	SEC61A1	P61619	476 aa	Known RBP	13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	DGCR2	P98153	550 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	MC2R	Q01718	297 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	BDH1	Q02338	343 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	KLF9	Q13886	244 aa	Predicted RBP	13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	BCORP1	Q8N888	145 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	ADAMTS18	Q8TE60	1221 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	ZFP3	Q96NJ6	502 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	OR2A7	Q96R45	310 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	FKRP	Q9H9S5	495 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	NKIRAS2	Q9NYR9	191 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268	FER1L5	A0AVI2	2057 aa		13.57	□□□□□ -0.24
CHFR-223	ENST00000544268		A0A1B0GUH1	482 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	OR2M5	A3KFT3	312 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	HMSD	A8MTL9	139 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	STMND1	H3BQB6	276 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268		H7C1C5	153 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	CLDN4	O14493	209 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	CSTA	P01040	98 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	CPN1	P15169	458 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	RAB3B	P20337	219 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	CD96	P40200	585 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	RPS11	P62280	158 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	LCN6	P62502	163 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	MICB	Q29980	383 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	EEF1A1P5	Q5VTE0	462 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	ZCCHC12	Q6PEW1	402 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	APOOL	Q6UXV4	268 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	PXK	Q7Z7A4	578 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	THAP4	Q8WY91	577 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	CCDC74B	Q96LY2	380 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	DERL3	Q96Q80	235 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	LMF2	Q9BU23	707 aa	Known RBP	13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	SLC25A18	Q9H1K4	315 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	NANS	Q9NR45	359 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	MED11	Q9P086	117 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	OR10H1	Q9Y4A9	318 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	BLOC1S5-TXNDC5	H3BN57	136 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	SLC6A6	P31641	620 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	CCR4	P51679	360 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	ACY1	Q03154	408 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	SWI5	Q1ZZU3	235 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	C1orf189	Q5VU69	101 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	GSG1L	Q6UXU4	331 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	LINC00114	Q6XXX2	140 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	STX12	Q86Y82	276 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	PRR22	Q8IZ63	422 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	ZNF511	Q8NB15	262 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	ZSCAN1	Q8NBB4	408 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	OR11G2	Q8NGC1	345 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	HOXB13	Q92826	284 aa	Predicted RBP	13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	MVB12A	Q96EY5	273 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	RTN4R	Q9BZR6	473 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	POLE3	Q9NRF9	147 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	MRPL15	Q9P015	296 aa	Known RBP	13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	KMT2E	Q8IZD2	1858 aa		13.56	□□□□□ -0.24
CHFR-223	ENST00000544268	IGKV1D-42	A0A075B6H8	117 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268		A0A1B0GTH9	108 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	LNP1	A1A4G5	178 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	ACOD1	A6NK06	481 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	SIX6	O95475	246 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	GPANK1	O95872	356 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	HIST1H2AB	P04908	130 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	CLDN12	P56749	244 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	IGLV3-21	P80748	117 aa	Predicted RBP	13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	TOMM20	Q15388	145 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	ZNHIT3	Q15649	155 aa	Predicted RBP	13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	HIST3H2A	Q7L7L0	130 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	HIST1H2AC	Q93077	130 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	SLC25A32	Q9H2D1	315 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	LANCL2	Q9NS86	450 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	GPN3	Q9UHW5	284 aa	Predicted RBP	13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	BLACE	A4D250	179 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	CDC14C	A4D256	554 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	NPIPB9	F8W1W9	429 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	GSTZ1	O43708	216 aa	Predicted RBP	13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	AQP8	O94778	261 aa		13.55	□□□□□ -0.24
CHFR-223	ENST00000544268	CLPS	P04118	112 aa		13.55	□□□□□ -0.24

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