RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 CDC42EP2O14613 210 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 SEMG1P04279 462 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 PATE4P0C8F1 98 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 TBC1D28Q2M2D7 210 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 SLC25A47Q6Q0C1 308 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 IGFN1Q86VF2 1251 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 CCDC197Q8NCU1 140 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 HTRA1Q92743 480 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 MRPL24Q96A35 216 aaKnown RBP20.08■□□□□ 0.81
CHFR-222ENST00000544093 FAM46AQ96IP4 442 aaKnown RBP20.08■□□□□ 0.81
CHFR-222ENST00000544093 SORCS2Q96PQ0 1159 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 DOK1Q99704 481 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 CCNB1IP1Q9NPC3 277 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 AURKCQ9UQB9 309 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 UGT2A1Q9Y4X1 527 aa20.08■□□□□ 0.81
CHFR-222ENST00000544093 IGHV4-30-2A0A087WSY4 118 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 NDUFB2O95178 105 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 SNAP29O95721 258 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 HOXB4P17483 251 aaPredicted RBP20.07■□□□□ 0.8
CHFR-222ENST00000544093 LIMS1P48059 325 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 PDLIM4P50479 330 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 PPP2R2BQ00005 443 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 FMODQ06828 376 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 MTX3Q5HYI7 312 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 FAM27BQ5VT28 67 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 MEX3DQ86XN8 651 aaKnown RBP20.07■□□□□ 0.8
CHFR-222ENST00000544093 SVOPLQ8N434 492 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 LRRC18Q8N456 261 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 FGFBP3Q8TAT2 258 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 C10orf105Q8TEF2 133 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 NEU4Q8WWR8 484 aaPredicted RBP20.07■□□□□ 0.8
CHFR-222ENST00000544093 POP5Q969H6 163 aaKnown RBP20.07■□□□□ 0.8
CHFR-222ENST00000544093 NSL1Q96IY1 281 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 GPX7Q96SL4 187 aaPredicted RBP20.07■□□□□ 0.8
CHFR-222ENST00000544093 CDH20Q9HBT6 801 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 DYNLRB1Q9NP97 96 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 NAV3Q8IVL0 2385 aa20.07■□□□□ 0.8
CHFR-222ENST00000544093 B2RBV5 119 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 FABP3P05413 133 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 MMP7P09237 267 aaPredicted RBP20.06■□□□□ 0.8
CHFR-222ENST00000544093 OMPP47874 163 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 PCBD1P61457 104 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 HSF2Q03933 536 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 GPR139Q6DWJ6 353 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 NSMAFQ92636 917 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 NABP1Q96AH0 204 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 WACQ9BTA9 647 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 MUC13Q9H3R2 512 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 IL1RAPQ9NPH3 570 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 SIGLEC7Q9Y286 467 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 V9GYQ6 96 aa20.06■□□□□ 0.8
CHFR-222ENST00000544093 ABCA1O95477 2261 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 LOC390937A0A1W2PQ73 354 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 GADD45GO95257 159 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 CALB2P22676 271 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 MSX2P35548 267 aaPredicted RBP20.05■□□□□ 0.8
CHFR-222ENST00000544093 IFNGR2P38484 337 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 ERVK-25P63136 954 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 LOXL1Q08397 574 aaPredicted RBP20.05■□□□□ 0.8
CHFR-222ENST00000544093 SGCAQ16586 387 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 IQCCQ4KMZ1 466 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 UNQ6126/PRO20091Q6UXV3 157 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 FOXL2NBQ6ZUU3 175 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 OR52J3Q8NH60 311 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 RSRC1Q96IZ7 334 aaKnown RBP20.05■□□□□ 0.8
CHFR-222ENST00000544093 ZNF570Q96NI8 536 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 PIMREGQ9BSJ6 248 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 MS4A5Q9H3V2 200 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 ACTR3BQ9P1U1 418 aa20.05■□□□□ 0.8
CHFR-222ENST00000544093 FN1P02751 2386 aaKnown RBP20.04■□□□□ 0.8
CHFR-222ENST00000544093 TRBV4-1A0A0J9YWV2 114 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 TMEM129A0AVI4 362 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 SH3PXD2BA1X283 911 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 SYNGR3O43761 229 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 PTP4A3O75365 173 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 DIRAS1O95057 198 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 CST2P09228 141 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 PCSK6P29122 969 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 SDHAP31040 664 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 CDAP32320 146 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 APLNRP35414 380 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 RAD52P43351 418 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 SELENOVP59797 346 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 SPIBQ01892 262 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 FAM122BQ7Z309 247 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 ADCK1Q86TW2 530 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 ALDH16A1Q8IZ83 802 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 MAPK1IP1LQ8NDC0 245 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 ZNF540Q8NDQ6 660 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 FUZQ9BT04 418 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 BCL2L14Q9BZR8 327 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 NRIP3Q9NQ35 241 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 TMCC3Q9ULS5 477 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 ADAM18Q9Y3Q7 739 aa20.04■□□□□ 0.8
CHFR-222ENST00000544093 IGKV1D-43A0A0B4J1Z2 117 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 UNC119BA6NIH7 251 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 M0R233 179 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 TLX2O43763 284 aaPredicted RBP20.03■□□□□ 0.8
CHFR-222ENST00000544093 GPRIN2O60269 458 aa20.03■□□□□ 0.8
CHFR-222ENST00000544093 KRT36O76013 467 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms