RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 HRGP04196 525 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 RFC3P40938 356 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 STARP49675 285 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 SUCLG1P53597 346 aaKnown RBP17.66■□□□□ 0.42
COPS7A-218ENST00000543939 CLDN17P56750 224 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 NANOS3P60323 173 aaKnown RBP17.66■□□□□ 0.42
COPS7A-218ENST00000543939 HSPB2Q16082 182 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 HIST3H3Q16695 136 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 TEX30Q5JUR7 227 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 HBMQ6B0K9 141 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 CREB3L2Q70SY1 520 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 GALNTL5Q7Z4T8 443 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.66■□□□□ 0.42
COPS7A-218ENST00000543939 ZNF454Q8N9F8 522 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 HAS2Q92819 552 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 OR8B4Q96RC9 309 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 KCNS3Q9BQ31 491 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 SLCO1C1Q9NYB5 712 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 IKZF2Q9UKS7 526 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 PEX16Q9Y5Y5 336 aa17.66■□□□□ 0.42
COPS7A-218ENST00000543939 CEP250Q9BV73 2442 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 ZNF726A6NNF4 738 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 J3QRK9 145 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 SMAD9O15198 467 aaKnown RBP17.65■□□□□ 0.42
COPS7A-218ENST00000543939 GPRIN2O60269 458 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 GLSO94925 669 aaPredicted RBP17.65■□□□□ 0.42
COPS7A-218ENST00000543939 POU3F2P20265 443 aaPredicted RBP17.65■□□□□ 0.42
COPS7A-218ENST00000543939 ENPP1P22413 925 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 CLDN15P56746 228 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 CARD18P57730 90 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 HNRNPA0Q13151 305 aaKnown RBP17.65■□□□□ 0.42
COPS7A-218ENST00000543939 SLC17A1Q14916 467 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 ACSM3Q53FZ2 586 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 SLC25A47Q6Q0C1 308 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 LRRC69Q6ZNQ3 347 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 CEACAM19Q7Z692 300 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 GLB1L2Q8IW92 636 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 OR9K2Q8NGE7 335 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 OR13C5Q8NGS8 318 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 OR2V1Q8NHB1 315 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 NSMAFQ92636 917 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 TTYH2Q9BSA4 534 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 PPIL3Q9H2H8 161 aaKnown RBP17.65■□□□□ 0.42
COPS7A-218ENST00000543939 SMURF1Q9HCE7 757 aa17.65■□□□□ 0.42
COPS7A-218ENST00000543939 CRNNQ9UBG3 495 aaPredicted RBP17.65■□□□□ 0.42
COPS7A-218ENST00000543939 PLEKHB1Q9UF11 243 aaPredicted RBP17.65■□□□□ 0.42
COPS7A-218ENST00000543939 IQCMA0A1B0GVH7 501 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 KLRC4-KLRK1H3BQV0 150 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CASKO14936 926 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 RPP14O95059 124 aaKnown RBP17.64■□□□□ 0.41
COPS7A-218ENST00000543939 SERPINA3P01011 423 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CD46P15529 392 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 ZNF823P16415 610 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 MTNR1BP49286 362 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 RPS11P62280 158 aaKnown RBP eCLIP17.64■□□□□ 0.41
COPS7A-218ENST00000543939 ROM1Q03395 351 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 INAQ16352 499 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 HYAL4Q2M3T9 481 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CARD17Q5XLA6 110 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CROCCP3Q8IVE0 287 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 TMEM251Q8N6I4 163 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 FNDC8Q8TC99 324 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 HSD17B8Q92506 261 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 PDCD1LG2Q9BQ51 273 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 SF3B5Q9BWJ5 86 aaKnown RBP17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CACNA1CQ13936 2221 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 TRABD2BA6NFA1 517 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 NPIPA2E9PIF3 369 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 NPIPA3F8WFD2 350 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 TLX3O43711 291 aaPredicted RBP17.64■□□□□ 0.41
COPS7A-218ENST00000543939 AQP8O94778 261 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CELA3AP09093 270 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 S100A5P33763 92 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 MEOX1P50221 254 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CDC20Q12834 499 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 ALKBH1Q13686 389 aaKnown RBP17.64■□□□□ 0.41
COPS7A-218ENST00000543939 EIF2B1Q14232 305 aaKnown RBP17.64■□□□□ 0.41
COPS7A-218ENST00000543939 UBQLNLQ8IYU4 475 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 ZNF679Q8IYX0 411 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 TEX19Q8NA77 164 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 SCMH1Q96GD3 660 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 MAP6Q96JE9 813 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 ABHD6Q9BV23 337 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 ELOVL3Q9HB03 270 aa17.64■□□□□ 0.41
COPS7A-218ENST00000543939 CDV3Q9UKY7 258 aaKnown RBP17.64■□□□□ 0.41
COPS7A-218ENST00000543939 FAM166BA8MTA8 275 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 CTDSP2O14595 271 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 CXCL13O43927 109 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 CALRP27797 417 aaKnown RBP17.63■□□□□ 0.41
COPS7A-218ENST00000543939 LAP3P28838 519 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 MAGEA5P43359 124 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 ARG2P78540 354 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 PLGLB1Q02325 96 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 FAM27D1Q5T7N8 215 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 ZIC4Q8N9L1 334 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 ZFP62Q8NB50 900 aaPredicted RBP17.63■□□□□ 0.41
COPS7A-218ENST00000543939 OR10D3Q8NH80 312 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 C11orf40Q8WZ69 217 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 MCHR2Q969V1 340 aa17.63■□□□□ 0.41
COPS7A-218ENST00000543939 ZNF385AQ96PM9 386 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms