RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 POMT2Q9UKY4 750 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 HS3ST3A1Q9Y663 406 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 VWA8A3KMH1 1905 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 SPTBN1Q01082 2364 aaKnown RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 ALOX12BO75342 701 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 RAB40ALP0C0E4 278 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 CXCL3P19876 107 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 FGF9P31371 208 aaPredicted RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 DLSTP36957 453 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 B3GNTL1Q67FW5 361 aaPredicted RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 OR2I1PQ8NGU4 316 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 RAB40AQ8WXH6 277 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 KIAA1143Q96AT1 154 aaPredicted RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 HSPA12AO43301 675 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 ZNF780AO75290 641 aaPredicted RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 NSA2O95478 260 aaKnown RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 POU3F3P20264 500 aaPredicted RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 SDHAP31040 664 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 CAPZBP47756 277 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 CLDN20P56880 219 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 NR0B2Q15466 257 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 OR2G2Q8NGZ5 317 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 PIGTQ969N2 578 aa14.64□□□□□ -0.07
VARS2-212ENST00000542001 LSM5Q9Y4Y9 91 aaKnown RBP14.64□□□□□ -0.07
VARS2-212ENST00000542001 WDR90Q96KV7 1748 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 A0A087WV62 115 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 TMEM212A6NML5 194 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 M0R036 132 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 HSPB6O14558 160 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 TBX6O95947 436 aaPredicted RBP14.63□□□□□ -0.07
VARS2-212ENST00000542001 ZNF136P52737 540 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 LINC00303Q3SY05 128 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 YIF1BQ5BJH7 314 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 PRR18Q8N4B5 295 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 OR5H2Q8NGV7 314 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 IGHV3-15A0A0B4J1V0 119 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 GMDSO60547 372 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 FBXO24O75426 580 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 PMP2P02689 132 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 CSF1P09603 554 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 RAB3AP20336 220 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 NFYAP23511 347 aaPredicted RBP14.63□□□□□ -0.07
VARS2-212ENST00000542001 ZNF616Q08AN1 781 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 BCL2A1Q16548 175 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 C14orf28Q4W4Y0 310 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 TMPRSS11FQ6ZWK6 438 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 PPP1R3BQ86XI6 285 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 LIX1LQ8IVB5 337 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 OR4S1Q8NGB4 309 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 C1QTNF6Q9BXI9 259 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 ZNF436Q9C0F3 470 aaPredicted RBP14.63□□□□□ -0.07
VARS2-212ENST00000542001 MCCC2Q9HCC0 563 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 MBD2Q9UBB5 411 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 CES1P1Q9UKY3 287 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 OIP5O43482 229 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 ENDOUP21128 410 aaKnown RBP14.63□□□□□ -0.07
VARS2-212ENST00000542001 NKAIN1Q4KMZ8 207 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 C3orf33Q6P1S2 294 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 PARP12Q9H0J9 701 aaKnown RBP14.63□□□□□ -0.07
VARS2-212ENST00000542001 ASH2LQ9UBL3 628 aa14.63□□□□□ -0.07
VARS2-212ENST00000542001 NKX2-2O95096 273 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 SERPINA5P05154 406 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 ZGLP1P0C6A0 271 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 POLR2HP52434 150 aaKnown RBP14.62□□□□□ -0.07
VARS2-212ENST00000542001 CCINQ13939 588 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 HNF4GQ14541 408 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 FAM199XQ6PEV8 388 aaPredicted RBP14.62□□□□□ -0.07
VARS2-212ENST00000542001 RFPL4BQ6ZWI9 263 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 TAAR8Q969N4 342 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 SIGLEC11Q96RL6 698 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 BRCA2P51587 3418 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 MEGF11A6BM72 1044 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 PHYHO14832 338 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 TBX19O60806 448 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 LDOC1O95751 146 aaPredicted RBP14.62□□□□□ -0.07
VARS2-212ENST00000542001 ERCC1P07992 297 aaPredicted RBP14.62□□□□□ -0.07
VARS2-212ENST00000542001 ZNF85Q03923 595 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 RBMS2Q15434 407 aaKnown RBP14.62□□□□□ -0.07
VARS2-212ENST00000542001 C2orf76Q3KRA6 126 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 TMEM244Q5VVB8 128 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 ANGPTL5Q86XS5 388 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 ARIH2OSQ8N7S6 290 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 OR5D14Q8NGL3 314 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 ZFAND1Q8TCF1 268 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 HOXB13Q92826 284 aaPredicted RBP14.62□□□□□ -0.07
VARS2-212ENST00000542001 NIPAL2Q9H841 368 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 LOC107986453A0A1B0GWG9 222 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 A8MVM7 634 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 SDCBPO00560 298 aaPredicted RBP14.62□□□□□ -0.07
VARS2-212ENST00000542001 DBHP09172 617 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 CD27P26842 260 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 CDAP32320 146 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 NPY4RP50391 375 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 ACY1Q03154 408 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 LYPD8Q6UX82 237 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 PAQR8Q8TEZ7 354 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 OR52A1Q9UKL2 312 aa14.62□□□□□ -0.07
VARS2-212ENST00000542001 A0A087WUJ7 227 aa14.61□□□□□ -0.07
VARS2-212ENST00000542001 EPOPA6NHQ4 379 aa14.61□□□□□ -0.07
VARS2-212ENST00000542001 FAM74A1Q5RGS3 127 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms