RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 COL25A1Q9BXS0 654 aaPredicted RBP8.27□□□□□ -1.09
THBS3-211ENST00000541990 FAM117AQ9C073 453 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 POFUT1Q9H488 388 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 EXO5Q9H790 373 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 MTHFD2LQ9H903 347 aaPredicted RBP8.27□□□□□ -1.09
THBS3-211ENST00000541990 KRCC1Q9NPI7 259 aaPredicted RBP8.27□□□□□ -1.09
THBS3-211ENST00000541990 HAO2Q9NYQ3 351 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 CALML5Q9NZT1 146 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 NDRG3Q9UGV2 375 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 NOSIPQ9Y314 301 aaKnown RBP8.27□□□□□ -1.09
THBS3-211ENST00000541990 MED31Q9Y3C7 131 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 R4GN57 208 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 CACNA1CQ13936 2221 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 ARPC4-TTLL3A0A0A6YYG9 625 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 C10orf142B7Z368 130 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 PRSS44E7EML9 344 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 ACTL6AO96019 429 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 CBR1P16152 277 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 NFYBP25208 207 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 STARP49675 285 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 SHBQ15464 509 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 RBMS3Q6XE24 437 aaKnown RBP8.27□□□□□ -1.09
THBS3-211ENST00000541990 PM20D2Q8IYS1 436 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 OR9A4Q8NGU2 314 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 NANPQ8TBE9 248 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 RASD2Q96D21 266 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 C10orf90Q96M02 699 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 OR2A5Q96R48 311 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 NUDT22Q9BRQ3 303 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 ULBP3Q9BZM4 244 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 APMAPQ9HDC9 416 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 KCNK7Q9Y2U2 307 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 ADAMTS9Q9P2N4 1935 aa8.27□□□□□ -1.09
THBS3-211ENST00000541990 A0A0A6YYC8 382 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 RNF222A6NCQ9 220 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 H7C417 338 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 I3L1I5 382 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 M0QYG6 137 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 PIAS2O75928 621 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 ACAA1P09110 424 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 OR2T7P0C7T2 308 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 MGMTP16455 207 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 PVALBP20472 110 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 ARFIP1P53367 373 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 LTBQ06643 244 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 RUNX2Q13950 521 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 NR0B2Q15466 257 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 NDUFAF6Q330K2 333 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 LYSMD4Q5XG99 296 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 ZNF425Q6IV72 752 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 SHISA6Q6ZSJ9 500 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 C1orf210Q8IVY1 113 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 ZNF511Q8NB15 262 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 OR51D1Q8NGF3 324 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 OR5T2Q8NGG2 359 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 OR1J2Q8NGS2 313 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 OR2T27Q8NH04 317 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 CRB3Q9BUF7 120 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 SOHLH2Q9NX45 425 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 MTFP1Q9UDX5 166 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 STEAP1Q9UHE8 339 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 PCOLCE2Q9UKZ9 415 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 ZNF281Q9Y2X9 895 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 GXYLT2A0PJZ3 443 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 TMEM218A2RU14 115 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 EIF3GO75821 320 aaKnown RBP eCLIP8.26□□□□□ -1.09
THBS3-211ENST00000541990 UBBP0CG47 229 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 UBCP0CG48 685 aaKnown RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 GIMD1P0DJR0 217 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 AFF3P51826 1226 aaKnown RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 RPS27AP62979 156 aaKnown RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 UBA52P62987 128 aaKnown RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 ARHGAP11BQ3KRB8 267 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 PLEKHN1Q494U1 663 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 UNQ6126/PRO20091Q6UXV3 157 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 LRRTM1Q86UE6 522 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 TMEM17Q86X19 198 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 UBALD2Q8IYN6 164 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 SYS1Q8N2H4 156 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 STEAP2Q8NFT2 490 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 OR6N1Q8NGY5 312 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 OR14A16Q8NHC5 309 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 FBXO17Q96EF6 278 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 VRK1Q99986 396 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 MFRPQ9BY79 579 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 DUSP15Q9H1R2 295 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 RXFP3Q9NSD7 469 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 CHRNA9Q9UGM1 479 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 TMEM184BQ9Y519 407 aaPredicted RBP8.26□□□□□ -1.09
THBS3-211ENST00000541990 ZNF780BQ9Y6R6 833 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 TRAV20A0A0B4J274 112 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 A0A1B0GWA3 101 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 RAD1O60671 282 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 ALOX12BO75342 701 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 RDH16O75452 317 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 ITGA10O75578 1167 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 RBBP9O75884 186 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 CRYBA1P05813 215 aa8.26□□□□□ -1.09
THBS3-211ENST00000541990 HOXC4P09017 264 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms