RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ROBO4Q8WZ75 1007 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 KISS1RQ969F8 398 aaPredicted RBP6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 NTNG2Q96CW9 530 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 LGALS12Q96DT0 336 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 ZHX1-C8orf76Q96EF9 292 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 SFXN2Q96NB2 322 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 IP6K3Q96PC2 410 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 FAM173AQ9BQD7 235 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 TRAF4Q9BUZ4 470 aaPredicted RBP6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 SLC19A3Q9BZV2 496 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 SYT4Q9H2B2 425 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 EVA1AQ9H8M9 152 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 FKRPQ9H9S5 495 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 NRIP3Q9NQ35 241 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 POLE4Q9NR33 117 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 CMC2Q9NRP2 79 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 ABI3Q9P2A4 366 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 TMA7Q9Y2S6 64 aaKnown RBP6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 PEX16Q9Y5Y5 336 aa6.9□□□□□ -1.31
AC005840.3-201ENST00000541888 RTTNQ86VV8 2226 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 CCDC182A6NF36 153 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SELENOFO60613 162 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 OR6A2O95222 327 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 MPZL1O95297 269 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 CDK1P06493 297 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 GRK5P34947 590 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 ACVR1BP36896 505 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 HTR3AP46098 478 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 MTNR1AP48039 350 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 CENPAP49450 140 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 NKX2-5P52952 324 aaPredicted RBP6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SOX8P57073 446 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 LSM3P62310 102 aaKnown RBP6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 PPIAP62937 165 aaKnown RBP6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 CSNK2BP67870 215 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 PUDPQ08623 228 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 MED22Q15528 200 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SGCBQ16585 318 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 MEP1BQ16820 701 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SLC25A53Q5H9E4 307 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 UBE2UQ5VVX9 321 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SLC25A25Q6KCM7 469 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 LRFN4Q6PJG9 635 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 RFPL4BQ6ZWI9 263 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SSX6Q7RTT6 188 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SNX29P2Q8IUI4 249 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 ADGRG4Q8IZF6 3080 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 GTPBP8Q8N3Z3 284 aaPredicted RBP6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 FAM109AQ8N4B1 249 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 NPEPL1Q8NDH3 523 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 SECISBP2Q96T21 854 aaKnown RBP6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 ASPNQ9BXN1 380 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 DCSTAMPQ9H295 470 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 ZNF71Q9NQZ8 489 aaPredicted RBP6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 DDX28Q9NUL7 540 aaKnown RBP6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 FKBP14Q9NWM8 211 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 B3GAT1Q9P2W7 334 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 GRHPRQ9UBQ7 328 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 TRAPPC4Q9Y296 219 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 MSRB2Q9Y3D2 182 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 COL12A1Q99715 3063 aa6.89□□□□□ -1.31
AC005840.3-201ENST00000541888 GTF3C1Q12789 2109 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 MED12LQ86YW9 2145 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 CACNA1AO00555 2505 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 A0A087WV48 116 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 HMX3A6NHT5 357 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 ETV2O00321 342 aaPredicted RBP6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 CXCL13O43927 109 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 CD14P08571 375 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 ZNF3P17036 446 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 SRD5A2P31213 254 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 ATP6V1E1P36543 226 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 SLC15A1P46059 708 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 P2RY4P51582 365 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 AP2S1P53680 142 aaPredicted RBP6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 BIDP55957 195 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 PRPS1P60891 318 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 VBP1P61758 197 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 GALK2Q01415 458 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 CAMK2DQ13557 499 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 TMEM44Q2T9K0 475 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 SOWAHCQ53LP3 525 aaPredicted RBP6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 YIF1BQ5BJH7 314 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 TMEM201Q5SNT2 666 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 ARHGAP11AQ6P4F7 1023 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 TMEM81Q6P7N7 255 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 DPY19L2P2Q6ZN68 376 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 IDO2Q6ZQW0 420 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 GGNQ86UU5 652 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 JAZF1Q86VZ6 243 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 OR6V1Q8N148 313 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 ZBTB8AQ96BR9 441 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 PLPPR2Q96GM1 343 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 SIGLEC11Q96RL6 698 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 TEAD3Q99594 435 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 SMAD5Q99717 465 aaKnown RBP6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 NUAK2Q9H093 628 aa6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 ISG20L2Q9H9L3 353 aaKnown RBP6.88□□□□□ -1.31
AC005840.3-201ENST00000541888 CHST11Q9NPF2 352 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms