RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ISG20L2Q9H9L3 353 aaKnown RBP24.66■■□□□ 1.54
CCM2-218ENST00000541586 OSGIN2Q9Y236 505 aa24.66■■□□□ 1.54
CCM2-218ENST00000541586 CCRL2O00421 344 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 CAMK2DQ13557 499 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 CTF1Q16619 201 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 PDSS1Q5T2R2 415 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 CREB3L2Q70SY1 520 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 SLC16A9Q7RTY1 509 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 ERI1Q8IV48 349 aaKnown RBP24.65■■□□□ 1.54
CCM2-218ENST00000541586 OR9K2Q8NGE7 335 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 ISYNA1Q9NPH2 558 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 TIGARQ9NQ88 270 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 ZNF835Q9Y2P0 537 aa24.65■■□□□ 1.54
CCM2-218ENST00000541586 ATE1O95260 518 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 IGHG1P01857 330 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 PGA4P0DJD7 388 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 PGA3P0DJD8 388 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 RPS3AP61247 264 aaKnown RBP24.64■■□□□ 1.54
CCM2-218ENST00000541586 EIF2S3LQ2VIR3 472 aaKnown RBP24.64■■□□□ 1.54
CCM2-218ENST00000541586 DOLPP1Q86YN1 238 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 ZNF845Q96IR2 970 aaPredicted RBP24.64■■□□□ 1.54
CCM2-218ENST00000541586 FOXN4Q96NZ1 517 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 MARCH7Q9H992 704 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 COPS3Q9UNS2 423 aa24.64■■□□□ 1.54
CCM2-218ENST00000541586 TRGV8A0A0C4DH27 118 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 LALBAP00709 142 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 GNLYP22749 145 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 GADD45AP24522 165 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 CENPAP49450 140 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 CLDN17P56750 224 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 ATCAYQ86WG3 371 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 NOXO1Q8NFA2 376 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 ROBO4Q8WZ75 1007 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 CPNE4Q96A23 557 aaPredicted RBP24.64■■□□□ 1.53
CCM2-218ENST00000541586 ADAD1Q96M93 576 aaKnown RBP24.64■■□□□ 1.53
CCM2-218ENST00000541586 SF3B5Q9BWJ5 86 aaKnown RBP24.64■■□□□ 1.53
CCM2-218ENST00000541586 YIPF3Q9GZM5 350 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 WDR76Q9H967 626 aa24.64■■□□□ 1.53
CCM2-218ENST00000541586 IGKV1D-43A0A0B4J1Z2 117 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 ZNF726A6NNF4 738 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 BLVRAP53004 296 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 CLRN1P58418 232 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 DNM1P34Q6PK57 102 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 GALNT11Q8NCW6 608 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 PRR7Q8TB68 274 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 RPL3LQ92901 407 aaKnown RBP24.63■■□□□ 1.53
CCM2-218ENST00000541586 ZNF385AQ96PM9 386 aaKnown RBP24.63■■□□□ 1.53
CCM2-218ENST00000541586 TRIB1Q96RU8 372 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 TTTY10Q9BZA0 68 aa24.63■■□□□ 1.53
CCM2-218ENST00000541586 COA3Q9Y2R0 106 aaPredicted RBP24.63■■□□□ 1.53
CCM2-218ENST00000541586 AHRRA9YTQ3 701 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 HLA-DQA2P01906 255 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 PCSK6P29122 969 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 UQCRFS1P47985 274 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 ACSM1Q08AH1 577 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 LIPKQ5VXJ0 399 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 CARD17Q5XLA6 110 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 RBP7Q96R05 134 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 INTS14Q96SY0 518 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 BCL7BQ9BQE9 202 aa24.62■■□□□ 1.53
CCM2-218ENST00000541586 TRIM64BA6NI03 449 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 FIGNL2A6NMB9 653 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 PYCARD-AS1I3L0S3 204 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 CPEP16870 476 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 CASP6P55212 293 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 LSM3P62310 102 aaKnown RBP24.61■■□□□ 1.53
CCM2-218ENST00000541586 GLO1Q04760 184 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 THEM4Q5T1C6 240 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 ABLIM2Q6H8Q1 611 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 KLBQ86Z14 1044 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 PHC2Q8IXK0 858 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 OR6N2Q8NGY6 317 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 C4orf36Q96KX1 117 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 BABAM2Q9NXR7 383 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 AKAP8O43823 692 aaKnown RBP24.61■■□□□ 1.53
CCM2-218ENST00000541586 MT-ND5P03915 603 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 OR12D2P58182 307 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 AQP6Q13520 282 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 CDC20BQ86Y33 519 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 ZIC4Q8N9L1 334 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 OR51E2Q9H255 320 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 MRPL22Q9NWU5 206 aaKnown RBP24.61■■□□□ 1.53
CCM2-218ENST00000541586 NDUFB11Q9NX14 153 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 PTTG2Q9NZH5 202 aa24.61■■□□□ 1.53
CCM2-218ENST00000541586 ZNF716A6NP11 495 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 ZNF670-ZNF695F2Z2N8 137 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 J3QLW9 94 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 AIREO43918 545 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 WDR1O75083 606 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 KHDRBS3O75525 346 aaKnown RBP24.6■■□□□ 1.53
CCM2-218ENST00000541586 GABRA1P14867 456 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 ZNF19P17023 458 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 TPBGQ13641 420 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 RPTNQ6XPR3 784 aa24.6■■□□□ 1.53
CCM2-218ENST00000541586 PNMA8CA0A1B0GUJ8 204 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 MAGEB4O15481 346 aaPredicted RBP24.59■■□□□ 1.53
CCM2-218ENST00000541586 ACTA2P62736 377 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 ACTG2P63267 376 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 HSF2Q03933 536 aa24.59■■□□□ 1.53
CCM2-218ENST00000541586 HIST3H3Q16695 136 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms