RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 GDF2Q9UK05 429 aaPredicted RBP14.62□□□□□ -0.07
CD9-209ENST00000540891 TMCC3Q9ULS5 477 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 IER3IP1Q9Y5U9 82 aa14.62□□□□□ -0.07
CD9-209ENST00000540891 MED13LQ71F56 2210 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 PRSS37A4D1T9 235 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 AQP12BA6NM10 295 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 ENTPD5O75356 428 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 DNAJC8O75937 253 aaPredicted RBP14.61□□□□□ -0.07
CD9-209ENST00000540891 TXNDC12O95881 172 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 IGHV4-39P01824 125 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 SERPINA5P05154 406 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 NPR2P20594 1047 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 THBS4P35443 961 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 KRR1Q13601 381 aaKnown RBP14.61□□□□□ -0.07
CD9-209ENST00000540891 ADIPOQQ15848 244 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 ETFDHQ16134 617 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 RFX4Q33E94 735 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 FAM98BQ52LJ0 330 aaKnown RBP14.61□□□□□ -0.07
CD9-209ENST00000540891 VHLLQ6RSH7 139 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 SMARCD3Q6STE5 483 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 DPY19L2P2Q6ZN68 376 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 AQP12AQ8IXF9 295 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 FANK1Q8TC84 345 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 GNPDA2Q8TDQ7 276 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 POP5Q969H6 163 aaKnown RBP14.61□□□□□ -0.07
CD9-209ENST00000540891 TRMT61AQ96FX7 289 aaKnown RBP14.61□□□□□ -0.07
CD9-209ENST00000540891 CADM1Q9BY67 442 aaKnown RBP14.61□□□□□ -0.07
CD9-209ENST00000540891 NDEL1Q9GZM8 345 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 ZNF442Q9H7R0 627 aa14.61□□□□□ -0.07
CD9-209ENST00000540891 GSC2O15499 205 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 AHCYL1O43865 530 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 MGRN1O60291 552 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 PPP1R3DO95685 299 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 SCG5P05408 212 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 RAP2AP10114 183 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 IFNGR2P38484 337 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 TSPAN31Q12999 210 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 MSMPQ1L6U9 139 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 SLC36A2Q495M3 483 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 FAM27BQ5VT28 67 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 GPR139Q6DWJ6 353 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 OR2T5Q6IEZ7 315 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 PTCHD4Q6ZW05 846 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 DPPA2Q7Z7J5 298 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 OR2T29Q8NH02 315 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 CANT1Q8WVQ1 401 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 FBXO17Q96EF6 278 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 CHID1Q9BWS9 393 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 FBXL3Q9UKT7 428 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 POMPQ9Y244 141 aa14.6□□□□□ -0.07
CD9-209ENST00000540891 TEP1Q99973 2627 aaKnown RBP14.6□□□□□ -0.07
CD9-209ENST00000540891 TRIM64A6NGJ6 449 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 TRIM64BA6NI03 449 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 H7C417 338 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 XKRYO14609 159 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 GASTP01350 101 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 OR4A8P0C604 315 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 APEHP13798 732 aaKnown RBP14.59□□□□□ -0.07
CD9-209ENST00000540891 CTLA4P16410 223 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 NR4A1P22736 598 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 LAP3P28838 519 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 SERPINF1P36955 418 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 CDKN2AP42771 156 aaKnown RBP14.59□□□□□ -0.07
CD9-209ENST00000540891 SNTB2Q13425 540 aaKnown RBP14.59□□□□□ -0.07
CD9-209ENST00000540891 EFNB3Q15768 340 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 SGCAQ16586 387 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 KRT80Q6KB66 452 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 TMEM53Q6P2H8 277 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 ZNF620Q6ZNG0 422 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 CIARTQ8N365 385 aaPredicted RBP14.59□□□□□ -0.07
CD9-209ENST00000540891 PAQR4Q8N4S7 273 aaPredicted RBP14.59□□□□□ -0.07
CD9-209ENST00000540891 SAMD8Q96LT4 415 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 SYT4Q9H2B2 425 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 RNF121Q9H920 327 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 POLE4Q9NR33 117 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 VSX1Q9NZR4 365 aaPredicted RBP14.59□□□□□ -0.07
CD9-209ENST00000540891 SLC7A8Q9UHI5 535 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 U3KQV3 271 aa14.59□□□□□ -0.07
CD9-209ENST00000540891 A0A1W2PPL8 197 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 DHRS12A0PJE2 317 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 SOCS2O14508 198 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 ARPC3O15145 178 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 CCNB2O95067 398 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 STAMBPO95630 424 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 CCL2P13500 99 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 ZNF32P17041 273 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 SLC6A6P31641 620 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 RPS6KA3P51812 740 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 DAG1Q14118 895 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 ENDOGQ14249 297 aaKnown RBP14.58□□□□□ -0.08
CD9-209ENST00000540891 FLOT2Q14254 428 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 UGT2A3Q6UWM9 527 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 DNM1P46Q6ZS02 220 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 ADCK1Q86TW2 530 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 LINC00471Q8N535 108 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 CPEB3Q8NE35 698 aaKnown RBP14.58□□□□□ -0.08
CD9-209ENST00000540891 SLC30A7Q8NEW0 376 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 ERMAPQ96PL5 475 aaPredicted RBP14.58□□□□□ -0.08
CD9-209ENST00000540891 EGLN3Q9H6Z9 239 aa14.58□□□□□ -0.08
CD9-209ENST00000540891 REEP1Q9H902 201 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms