RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 OR8B4Q96RC9 309 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 AIFM2Q9BRQ8 373 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 MFFQ9GZY8 342 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 S1PR5Q9H228 398 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 EPHA6Q9UF33 1036 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 KCNG2Q9UJ96 466 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 VCANP13611 3396 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 TRIOO75962 3097 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 D6RAR5 112 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 H3BUI4 141 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 SULT1C2O00338 296 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 PMS2P2O95744 297 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 IL33O95760 270 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 TACR3P29371 465 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 CCKBRP32239 447 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 MAZP56270 477 aaKnown RBP11.11□□□□□ -0.63
NPC1-202ENST00000540608 ARHGAP40Q5TG30 622 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 GABRG1Q8N1C3 465 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 ADAM19Q9H013 955 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 ATG5Q9H1Y0 275 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 POFUT1Q9H488 388 aa11.11□□□□□ -0.63
NPC1-202ENST00000540608 MPDZO75970 2070 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 TCRBV21S2A2A0A5A6 115 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 NSA2O95478 260 aaKnown RBP11.1□□□□□ -0.63
NPC1-202ENST00000540608 HPP00738 406 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 FBXO45P0C2W1 286 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 GALNSP34059 522 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 HSD17B7P56937 341 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 TAS2R19P59542 299 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ACTBP60709 375 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ACTG1P63261 375 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 SORDQ00796 357 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 HHEXQ03014 270 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 MEP1BQ16820 701 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 STPG2Q8N412 459 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ZNF454Q8N9F8 522 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 TMEM229BQ8NBD8 167 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ZNF563Q8TA94 476 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ASB17Q8WXJ9 295 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 KCNK15Q9H427 330 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 LDAHQ9H6V9 325 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 GMEB2Q9UKD1 530 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 TCRBV16S1A1N1A0A5B0 115 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 SDC3O75056 442 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 UTS2O95399 124 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ZNF273Q14593 569 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 TEX30Q5JUR7 227 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ASPHD2Q6ICH7 369 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 DUSP19Q8WTR2 217 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 SLC25A28Q96A46 364 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 MRPL38Q96DV4 380 aaKnown RBP11.1□□□□□ -0.63
NPC1-202ENST00000540608 SEH1LQ96EE3 360 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 ELF4Q99607 663 aaPredicted RBP11.1□□□□□ -0.63
NPC1-202ENST00000540608 SLC25A21Q9BQT8 299 aaPredicted RBP11.1□□□□□ -0.63
NPC1-202ENST00000540608 SLC25A32Q9H2D1 315 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 PIAS3Q9Y6X2 628 aa11.1□□□□□ -0.63
NPC1-202ENST00000540608 FCER2P06734 321 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 OR4E1P0C645 316 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 RABIFP47224 123 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 C1orf61Q13536 156 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 COL13A1Q5TAT6 717 aaPredicted RBP11.09□□□□□ -0.63
NPC1-202ENST00000540608 ZNF679Q8IYX0 411 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 C12orf45Q8N5I9 185 aaPredicted RBP11.09□□□□□ -0.63
NPC1-202ENST00000540608 OR1J4Q8NGS1 313 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 RNF128Q8TEB7 428 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 ATOH1Q92858 354 aaPredicted RBP11.09□□□□□ -0.63
NPC1-202ENST00000540608 PELOQ9BRX2 385 aaKnown RBP11.09□□□□□ -0.63
NPC1-202ENST00000540608 MS4A7Q9GZW8 240 aaPredicted RBP11.09□□□□□ -0.63
NPC1-202ENST00000540608 MYOZ1Q9NP98 299 aaPredicted RBP11.09□□□□□ -0.63
NPC1-202ENST00000540608 B9D1Q9UPM9 204 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 SPTBP11277 2137 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 KNL1Q8NG31 2342 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 TRAV14DV4A0A0A6YYC5 116 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 C17orf105B2RV13 164 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 RAB3DO95716 219 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 GABRG2P18507 467 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 PPICP45877 212 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 SERTAD2Q14140 314 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 MELKQ14680 651 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 CLVS2Q5SYC1 327 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 TMEM205Q6UW68 189 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
NPC1-202ENST00000540608 EDAQ92838 391 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 KLHDC3Q9BQ90 382 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 POTEKPQ9BYX7 375 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 LAT2Q9GZY6 243 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 GPR160Q9UJ42 338 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 FBXL2Q9UKC9 423 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 SLC22A13Q9Y226 551 aa11.09□□□□□ -0.63
NPC1-202ENST00000540608 TMEM82A0PJX8 343 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 XKRYO14609 159 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 TSPAN9O75954 239 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 SPDEFO95238 335 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 SEMA4FO95754 770 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 PNPP00491 289 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 HLA-DQA2P01906 255 aa11.08□□□□□ -0.64
NPC1-202ENST00000540608 BGLAPP02818 100 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms