RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 OR52D1Q9H346 318 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 DENND2DQ9H6A0 471 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 SIAEQ9HAT2 523 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 CA10Q9NS85 328 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 GDF2Q9UK05 429 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 POMPQ9Y244 141 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 U3KQV3 271 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 MED13LQ71F56 2210 aa15.84■□□□□ 0.13
SNRPA1-203ENST00000540017 TEP1Q99973 2627 aaKnown RBP15.83■□□□□ 0.13
SNRPA1-203ENST00000540017 PRSS37A4D1T9 235 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 AQP12BA6NM10 295 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 SOCS2O14508 198 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 PPP1R3DO95685 299 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 RAB36O95755 333 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 GASTP01350 101 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 MMP7P09237 267 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 SDHAP31040 664 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 ERFP50548 548 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 TSPAN31Q12999 210 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 KRR1Q13601 381 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 FLOT2Q14254 428 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 ADIPOQQ15848 244 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 SGCAQ16586 387 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 RFX4Q33E94 735 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 PRSS57Q6UWY2 283 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 FOXL2NBQ6ZUU3 175 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 PTCHD4Q6ZW05 846 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 AQP12AQ8IXF9 295 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 NUP37Q8NFH4 326 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 OR4F15Q8NGB8 312 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 FNDC8Q8TC99 324 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 FBXO17Q96EF6 278 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 SAMD8Q96LT4 415 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 CACNG6Q9BXT2 260 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 RNF121Q9H920 327 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 DLL4Q9NR61 685 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 SLC7A8Q9UHI5 535 aa15.83■□□□□ 0.12
SNRPA1-203ENST00000540017 DHRS12A0PJE2 317 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 XKRYO14609 159 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 ENTPD5O75356 428 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 STAMBPO95630 424 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 TXNDC12O95881 172 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 IGHV4-39P01824 125 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 SERPINA5P05154 406 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 NR2C1P13056 603 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 CD99P14209 185 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 CTLA4P16410 223 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 THBS4P35443 961 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 IFNGR2P38484 337 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 CDKN2AP42771 156 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 DBPQ10586 325 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 SWI5Q1ZZU3 235 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 GPR139Q6DWJ6 353 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 KRT80Q6KB66 452 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 ZNF620Q6ZNG0 422 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 IL17RDQ8NFM7 739 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 POP5Q969H6 163 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 Q96MF0 132 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 FOXN4Q96NZ1 517 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 ERMAPQ96PL5 475 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 NDEL1Q9GZM8 345 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 EGLN3Q9H6Z9 239 aa15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 SAMHD1Q9Y3Z3 626 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-203ENST00000540017 A0A1W2PPL8 197 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 TCRBV3S1A0A5B6 114 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 MGRN1O60291 552 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 CCNB2O95067 398 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 OR4A8P0C604 315 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 CCL2P13500 99 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 NPR2P20594 1047 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 NR4A1P22736 598 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 LAP3P28838 519 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 MSMPQ1L6U9 139 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 SLC36A2Q495M3 483 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 FAM27BQ5VT28 67 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 TMEM53Q6P2H8 277 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 DPPA2Q7Z7J5 298 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 SPATA24Q86W54 205 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 PAQR4Q8N4S7 273 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 TRMT61AQ96FX7 289 aaKnown RBP15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 SYT4Q9H2B2 425 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 REEP1Q9H902 201 aa15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 VSX1Q9NZR4 365 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-203ENST00000540017 TRIM64A6NGJ6 449 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 TRIM64BA6NI03 449 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 AHCYL1O43865 530 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 GPRIN2O60269 458 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 CST1P01037 141 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 IGFBP1P08833 259 aaPredicted RBP15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 APEHP13798 732 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 ZNF32P17041 273 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 SLC6A6P31641 620 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 SERPINF1P36955 418 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 RPS6KA3P51812 740 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 SNTB2Q13425 540 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 DAG1Q14118 895 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 ENDOGQ14249 297 aaKnown RBP15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 MICAQ29983 383 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 PABPC1L2AQ5JQF8 200 aa15.8■□□□□ 0.12
SNRPA1-203ENST00000540017 OTPQ5XKR4 325 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms