RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CD14P08571 375 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 GABRR1P24046 479 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 HTR2CP28335 458 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 BDKRB2P30411 391 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 HOXD11P31277 338 aaPredicted RBP9.11□□□□□ -0.95
TRAF1-202ENST00000540010 P2RX3P56373 397 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 CLDN20P56880 219 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 TEKQ02763 1124 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 MELKQ14680 651 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 MED25Q71SY5 747 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF679Q8IYX0 411 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 OR4D11Q8NGI4 311 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 OR5D14Q8NGL3 314 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 C3orf49Q96BT1 292 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 C10orf90Q96M02 699 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 VRK1Q99986 396 aaPredicted RBP9.11□□□□□ -0.95
TRAF1-202ENST00000540010 SDHAF2Q9NX18 166 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 SLC23A1Q9UHI7 598 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 GMEB2Q9UKD1 530 aa9.11□□□□□ -0.95
TRAF1-202ENST00000540010 C2orf72A6NCS6 295 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 RAB3AP20336 220 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 BCKDHBP21953 392 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 PPT1P50897 306 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 AFF3P51826 1226 aaKnown RBP9.1□□□□□ -0.95
TRAF1-202ENST00000540010 ALKBH1Q13686 389 aaKnown RBP9.1□□□□□ -0.95
TRAF1-202ENST00000540010 RSU1Q15404 277 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 P4HA3Q7Z4N8 544 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 UEVLDQ8IX04 471 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 CMTM4Q8IZR5 234 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 CMC2Q9NRP2 79 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 TMEM74BQ9NUR3 256 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 DHCR7Q9UBM7 475 aaKnown RBP9.1□□□□□ -0.95
TRAF1-202ENST00000540010 GLS2Q9UI32 602 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 ARPC4-TTLL3A0A0A6YYG9 625 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 LMO7DNF2Z398 122 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 SURF4O15260 269 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 HCRTR1O43613 425 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 RGS11O94810 467 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 SMIM10L1P0DMW3 83 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 CDK2P24941 298 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 DCTDP32321 178 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 LSM11P83369 360 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRAF1-202ENST00000540010 C14orf28Q4W4Y0 310 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 TRAPPC6BQ86SZ2 158 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 PM20D2Q8IYS1 436 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 SIRT6Q8N6T7 355 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 MR1Q95460 341 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 SMIM10Q96HG1 83 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 KCNJ16Q9NPI9 418 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 QPCTLQ9NXS2 382 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 C19orf53Q9UNZ5 99 aaPredicted RBP9.1□□□□□ -0.95
TRAF1-202ENST00000540010 LCATP04180 440 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 LIMS3P0CW19 117 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 LIMS4P0CW20 117 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 GLI4P10075 376 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 MAOAP21397 527 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 IL32P24001 234 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 HMGA2P52926 109 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 OR10K2Q6IF99 312 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 Q6ZTK2 550 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 SGPP2Q8IWX5 399 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 TMEM52Q8NDY8 209 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 NKX3-1Q99801 234 aaPredicted RBP9.1□□□□□ -0.95
TRAF1-202ENST00000540010 ATF6BQ99941 703 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 WFDC6Q9BQY6 131 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 PTDSS2Q9BVG9 487 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 OR10A5Q9H207 317 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 ANKRD19PQ9H560 264 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 PLEK2Q9NYT0 353 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 SLC7A11Q9UPY5 501 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 ASXL3Q9C0F0 2248 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 ABCA7Q8IZY2 2146 aa9.1□□□□□ -0.95
TRAF1-202ENST00000540010 TEX51A0A1B0GUA7 166 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 NUDT21O43809 227 aaKnown RBP9.09□□□□□ -0.95
TRAF1-202ENST00000540010 CTSBP07858 339 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SLC2A1P11166 492 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SERPINA2P20848 420 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 FASLGP48023 281 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 PPA1Q15181 289 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 TOR2AQ5JU69 321 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 GPR139Q6DWJ6 353 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 FAM122CQ6P4D5 195 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SCGB1C1Q8TD33 95 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF160Q9HCG1 818 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 PRUNE2Q8WUY3 3088 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 TLCD2A6NGC4 264 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 GABARAPH6UMI1 98 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 IL33O95760 270 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 ENDOUP21128 410 aaKnown RBP9.09□□□□□ -0.95
TRAF1-202ENST00000540010 ZNF84P51523 738 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 OR1D5P58170 312 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 STARD6P59095 220 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 FUT5Q11128 374 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 KCNAB1Q14722 419 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SVBPQ8N300 66 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 OR2L13Q8N349 312 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 SLAMF9Q96A28 289 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 PNPLA2Q96AD5 504 aa9.09□□□□□ -0.95
TRAF1-202ENST00000540010 PARP12Q9H0J9 701 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms