RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CLDN2P57739 230 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 LCN6P62502 163 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 TRA2BP62995 288 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 LMAN2Q12907 356 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 OR2B11Q5JQS5 317 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 MANEAQ5SRI9 462 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ANKRD16Q6P6B7 361 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 LCTLQ6UWM7 567 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 OR2W3Q7Z3T1 314 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 KLHDC8AQ8IYD2 350 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 C1orf87Q8N0U7 546 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 BEND2Q8NDZ0 799 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 OR14C36Q8NHC7 312 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 AKR1E2Q96JD6 320 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ULBP3Q9BZM4 244 aa4.96□□□□□ -1.62
PTPRD-213ENST00000537002 EXOSC3Q9NQT5 275 aaKnown RBP4.96□□□□□ -1.62
PTPRD-213ENST00000537002 ANKRD20A5PA0PJZ0 165 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 BPNT1O95861 308 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 SCN1AP35498 2009 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 CARD17Q5XLA6 110 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM91Q6ZNR0 172 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 SERINC5Q86VE9 423 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 FAM185AQ8N0U4 392 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR5M8Q8NGP6 311 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TAAR8Q969N4 342 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 NXPE3Q969Y0 559 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 C16orf58Q96GQ5 468 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR7D2Q96RA2 312 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 RHOFQ9HBH0 211 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 WSB2Q9NYS7 404 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 STEAP1Q9UHE8 339 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 RHBDD3Q9Y3P4 386 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PTGESO14684 152 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 RAD51DO75771 328 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 DFFBO76075 338 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PMP2P02689 132 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 HOXC4P09017 264 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PTHLHP12272 177 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 RCC1P18754 421 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 FUT1P19526 365 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OMGP23515 440 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 POU3F4P49335 361 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM244Q5VVB8 128 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR2T2Q6IF00 324 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM182Q6ZP80 229 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM151BQ8IW70 566 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF485Q8NCK3 441 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 FBXO17Q96EF6 278 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 VPS25Q9BRG1 176 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR11A1Q9GZK7 315 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ESRP2Q9H6T0 727 aaKnown RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ISG20L2Q9H9L3 353 aaKnown RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TXNRD2Q9NNW7 524 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 KLK11Q9UBX7 282 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1W2PRU2 124 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 SYT7O43581 403 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 KLF8O95600 359 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 MMP2P08253 660 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 SRMP19623 302 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF136P52737 540 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR1Q1Q15612 314 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ALG10Q5BKT4 473 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ATPAF1Q5TC12 328 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 METTL27Q8N6F8 245 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR6T1Q8NGN1 323 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 SPOCK3Q9BQ16 436 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PDCD1LG2Q9BQ51 273 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 CFHR5Q9BXR6 569 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 NMNAT2Q9BZQ4 307 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TSPAN10Q9H1Z9 355 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 IL23AQ9NPF7 189 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 FBXO4Q9UKT5 387 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PLEKHM1Q9Y4G2 1056 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PLXNA1Q9UIW2 1896 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TRBV5-4A0A0C4DH59 114 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TCAPO15273 167 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 GP1BBP13224 206 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 FGF7P21781 194 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 EIF4EBP2Q13542 120 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 TCTN3Q6NUS6 607 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PAQR9Q6ZVX9 377 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 COX15Q7KZN9 410 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF383Q8NA42 475 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR56B1Q8NGI3 324 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 SLC17A9Q9BYT1 436 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 KCNS2Q9ULS6 477 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 V9GYS6 101 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 CNOT4O95628 575 aaKnown RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 PTBP3O95758 552 aaKnown RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 HIST1H1BP16401 226 aaKnown RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 SEC13P55735 322 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF385BQ569K4 471 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 GALNT16Q8N428 558 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 OR5AR1Q8NGP9 310 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 MIB2Q96AX9 1013 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 LRIG1Q96JA1 1093 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 GABRQQ9UN88 632 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1W2PQ45 241 aaPredicted RBP4.95□□□□□ -1.62
PTPRD-213ENST00000537002 A0A1W2PQY0 241 aa4.95□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF726A6NNF4 738 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms