RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	SMAD9	O15198	467 aa	Known RBP	12.5	□□□□□ -0.41
POLE-208	ENST00000535934	AGR2	O95994	175 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	PLAU	P00749	431 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	KHK	P50053	298 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	MVD	P53602	400 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	RIPPLY3	P57055	190 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	KCNJ10	P78508	379 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	RNPS1	Q15287	305 aa	Known RBP	12.5	□□□□□ -0.41
POLE-208	ENST00000535934	ZBTB37	Q5TC79	503 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	LCN1P1	Q5VSP4	162 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	METAP1D	Q6UB28	335 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-208	ENST00000535934	BEND4	Q6ZU67	534 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	PLEKHM3	Q6ZWE6	761 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	GALNT5	Q7Z7M9	940 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	FAM86B1	Q8N7N1	296 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	OR9Q1	Q8NGQ5	310 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	OR5B2	Q96R09	309 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	ACTR6	Q9GZN1	396 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	PPA2	Q9H2U2	334 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	GSX1	Q9H4S2	264 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-208	ENST00000535934	CTPS2	Q9NRF8	586 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	POLE3	Q9NRF9	147 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	C14orf119	Q9NWQ9	140 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	ERVK13-1	Q9NX77	482 aa		12.5	□□□□□ -0.41
POLE-208	ENST00000535934	PDP1	Q9P0J1	537 aa	Predicted RBP	12.5	□□□□□ -0.41
POLE-208	ENST00000535934	ZMAT5	Q9UDW3	170 aa	Known RBP	12.5	□□□□□ -0.41
POLE-208	ENST00000535934		A0A0X1KG70	313 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	ORC5	O43913	435 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	ADORA3	P0DMS8	318 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	PSMB1	P20618	241 aa	Known RBP	12.49	□□□□□ -0.41
POLE-208	ENST00000535934	GTDC1	Q4AE62	458 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934		Q5BKY6	102 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	TMEM201	Q5SNT2	666 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	LRIF1	Q5T3J3	769 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	C3orf33	Q6P1S2	294 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.49	□□□□□ -0.41
POLE-208	ENST00000535934	ENTHD1	Q8IYW4	607 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	CLDN22	Q8N7P3	220 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	YIPF7	Q8N8F6	280 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	DUSP18	Q8NEJ0	188 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	AP3S1	Q92572	193 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	ARL5B	Q96KC2	179 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	CHCHD6	Q9BRQ6	235 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	RANBP3	Q9H6Z4	567 aa	Predicted RBP	12.49	□□□□□ -0.41
POLE-208	ENST00000535934	UBTD1	Q9HAC8	227 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	VAPA	Q9P0L0	249 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	ING4	Q9UNL4	249 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934		V9GYH0	126 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	PLCE1	Q9P212	2302 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934	ALPK2	Q86TB3	2170 aa		12.49	□□□□□ -0.41
POLE-208	ENST00000535934		A0A1W2PQ09	198 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	AP3D1	O14617	1153 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	MITF	O75030	526 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	SLC43A1	O75387	559 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	SLC22A5	O76082	557 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	PIP	P12273	146 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	ANXA8	P13928	327 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	HOXB1	P14653	301 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	PGC	P20142	388 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	NTF4	P34130	210 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	DIO1	P49895	249 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	CD83	Q01151	205 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	IL1RL1	Q01638	556 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	ACKR1	Q16570	336 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	SYT14P1	Q58G82	188 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	TMPPE	Q6ZT21	453 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	ATG4D	Q86TL0	474 aa	Predicted RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	SERPINA11	Q86U17	422 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	ADGRG3	Q86Y34	549 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	WFDC8	Q8IUA0	241 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	GIMAP1	Q8WWP7	306 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	GGH	Q92820	318 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	S100PBP	Q96BU1	408 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	ITCH	Q96J02	903 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934		Q96MT0	163 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	NEDD4L	Q96PU5	975 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	FYTTD1	Q96QD9	318 aa	Known RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	DCLRE1C	Q96SD1	692 aa	Known RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	OR11A1	Q9GZK7	315 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	OR51E2	Q9H255	320 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	BCO1	Q9HAY6	547 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	SLC35A3	Q9Y2D2	325 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	GPR52	Q9Y2T5	361 aa		12.48	□□□□□ -0.41
POLE-208	ENST00000535934	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	FN1	P02751	2386 aa	Known RBP	12.48	□□□□□ -0.41
POLE-208	ENST00000535934	TRBV5-3	A0A0A0MS03	114 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	RGS5	O15539	181 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	CYTIP	O60759	359 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	ADA	P00813	363 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	IFNA7	P01567	189 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	HLA-DQB1	P01920	261 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	PPP3CB	P16298	524 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	C4BPB	P20851	252 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	TGFBR1	P36897	503 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	NKX6-1	P78426	367 aa	Predicted RBP	12.47	□□□□□ -0.41
POLE-208	ENST00000535934	RASGEF1B	Q0VAM2	473 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	ALKBH2	Q6NS38	261 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	SLC43A2	Q8N370	569 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	OR10Z1	Q8NGY1	313 aa		12.47	□□□□□ -0.41
POLE-208	ENST00000535934	UBASH3B	Q8TF42	649 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms