RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SLC6A5Q9Y345 797 aa2.61□□□□□ -1.99
SNHG1-202ENST00000535689 ZNF175Q9Y473 711 aa2.61□□□□□ -1.99
SNHG1-202ENST00000535689 MMP24Q9Y5R2 645 aa2.61□□□□□ -1.99
SNHG1-202ENST00000535689 NOTCH1P46531 2555 aa2.61□□□□□ -1.99
SNHG1-202ENST00000535689 FREM1Q5H8C1 2179 aa2.61□□□□□ -1.99
SNHG1-202ENST00000535689 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.6□□□□□ -1.993e-19■■■■■ 71.3
SNHG1-202ENST00000535689 MED12Q93074 2177 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 TRBV5-4A0A0C4DH59 114 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ZNF487B1APH4 448 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 C11orf98E9PRG8 122 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 H0YIG0 161 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 BTN3A3O00478 584 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PES1O00541 588 aaKnown RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 STX7O15400 261 aaKnown RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 UGT1A9O60656 530 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 HCN1O60741 890 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 AP2A1O95782 977 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 EPPINO95925 133 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 F10P00742 488 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 FTH1P02794 183 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 UGT2B7P16662 529 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 TNNI3P19429 210 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 CNR1P21554 472 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PSMA2P25787 234 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PBLDP30039 288 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PCK1P35558 622 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 SLC26A3P40879 764 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ID1P41134 155 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 OR1D4P47884 311 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 GABRA4P48169 554 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 HLCSP50747 726 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ATP4BP51164 291 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 NDUFA8P51970 172 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 MTTPP55157 894 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 STX17P56962 302 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 VSX2P58304 361 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 KRTAP10-6P60371 365 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 GMFBP60983 142 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 RPS4XP62701 263 aaKnown RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 NAAAQ02083 359 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 RELAQ04206 551 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PIGHQ14442 188 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PDK2Q15119 407 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 TMEM44Q2T9K0 475 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ACSF3Q4G176 576 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 CYBRD1Q53TN4 286 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 CCDC183Q5T5S1 534 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 C1orf185Q5T7R7 199 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PRAMEF7Q5VXH5 474 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ATRAIDQ6UW56 229 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 SYT10Q6XYQ8 523 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 SHISA6Q6ZSJ9 500 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 SLC26A11Q86WA9 606 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 Q8N377 158 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 CADM2Q8N3J6 435 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ZFP62Q8NB50 900 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PLPP5Q8NEB5 264 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 OR5K2Q8NHB8 316 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 JOSD2Q8TAC2 188 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 C11orf45Q8TAV5 145 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 NELFBQ8WX92 580 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 FCGR1BQ92637 280 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 NCLNQ969V3 563 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 RERGQ96A58 199 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 TMEM45BQ96B21 275 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 C8orf44Q96CB5 159 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 VPS39Q96JC1 886 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 FOPNLQ96NB1 174 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ZFP3Q96NJ6 502 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PPP1R2P1Q96PQ5 205 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ALS2CR12Q96Q35 445 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ATOH8Q96SQ7 321 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 COPS8Q99627 209 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 CCL19Q99731 98 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 EBNA1BP2Q99848 306 aaKnown RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 APOL2Q9BQE5 337 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 CCDC77Q9BR77 488 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 FICDQ9BVA6 458 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 C19orf24Q9BVV8 132 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 DEFB126Q9BYW3 111 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 SLC25A51Q9H1U9 297 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 UGT1A8Q9HAW9 530 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 SLC25A19Q9HC21 320 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 FAM60AQ9NP50 221 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 SMOXQ9NWM0 555 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ZNF581Q9P0T4 197 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 DPM3Q9P2X0 92 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PCSK1NQ9UHG2 260 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 LCMT1Q9UIC8 334 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 NEU3Q9UQ49 428 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 ASF1AQ9Y294 204 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 YARS2Q9Y2Z4 477 aaKnown RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 FBXO7Q9Y3I1 522 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 PCYT1BQ9Y5K3 369 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 HEATR1Q9H583 2144 aaKnown RBP2.6□□□□□ -1.99
SNHG1-202ENST00000535689 USF3Q68DE3 2245 aa2.6□□□□□ -1.99
SNHG1-202ENST00000535689 CUBNO60494 3623 aa2.59□□□□□ -1.99
SNHG1-202ENST00000535689 MED12LQ86YW9 2145 aa2.59□□□□□ -1.99
SNHG1-202ENST00000535689 TRGV5A0A0B4J1U4 118 aa2.59□□□□□ -1.99
SNHG1-202ENST00000535689 TEX48A0A1B0GUV7 120 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms