RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ALG10Q5BKT4 473 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 ICA1LQ8NDH6 482 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF519Q8TB69 540 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 SYNPRQ8TBG9 265 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 SNX33Q8WV41 574 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 RCN3Q96D15 328 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 BPIFA2Q96DR5 249 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 BCL2L14Q9BZR8 327 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 TXNIPQ9H3M7 391 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 SMURF2Q9HAU4 748 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 SLCO1C1Q9NYB5 712 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 TAAR3PQ9P1P4 343 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 ARMCX1Q9P291 453 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 HIF3AQ9Y2N7 669 aa13.88□□□□□ -0.19
CLSTN3-204ENST00000535313 PIP5K1CO60331 668 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 SLC2A10O95528 541 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 MMP7P09237 267 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF250P15622 560 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 COL8A2P25067 703 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 CDAP32320 146 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 CDH15P55291 814 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 UCP2P55851 309 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 TMEM33P57088 247 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 MRPS34P82930 218 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 TOP3AQ13472 1001 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 TMEM154Q6P9G4 183 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 POU5F2Q8N7G0 328 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 RP9Q8TA86 221 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 NSMAFQ92636 917 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 HDAC2Q92769 488 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 RBP7Q96R05 134 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 ALG12Q9BV10 488 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 FNDC11Q9BVV2 318 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 HINT3Q9NQE9 182 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 TMEFF2Q9UIK5 374 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 A4GNTQ9UNA3 340 aa13.87□□□□□ -0.19
CLSTN3-204ENST00000535313 CLPTM1O96005 669 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 IFNW1P05000 195 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 SAGP10523 405 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 DRD4P21917 467 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 PCMT1P22061 227 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 CCNOP22674 350 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 GUCA1AP43080 201 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 YAP1P46937 504 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 RPL27P61353 136 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 SGCAQ16586 387 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 MOGQ16653 247 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 PABPC1L2AQ5JQF8 200 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 FNDC8Q8TC99 324 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 C1orf159Q96HA4 380 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF416Q9BWM5 594 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 CMTM6Q9NX76 183 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 EIF3KQ9UBQ5 218 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 UGT2A1Q9Y4X1 527 aa13.86□□□□□ -0.19
CLSTN3-204ENST00000535313 IGLV3-9A0A075B6K5 115 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 C17orf100A8MU93 164 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 B4DSR2 109 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 GSTA4O15217 222 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 PPIHO43447 177 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 NCR1O76036 304 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF682O95780 498 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 MT-ND5P03915 603 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 STOMP27105 288 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 SRP14P37108 136 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 CTXN1P60606 82 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 ERVS71-1P61550 626 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 LIPEQ05469 1076 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 FMODQ06828 376 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 TRAM2Q15035 370 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 PCGF3Q3KNV8 242 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 THEM4Q5T1C6 240 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 FAM205BPQ63HN1 556 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 SLC25A47Q6Q0C1 308 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 UNQ6126/PRO20091Q6UXV3 157 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 VTCN1Q7Z7D3 282 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 NRMQ8IXM6 262 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 SLC15A3Q8IY34 581 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 OFCC1Q8IZS5 231 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 CPEB3Q8NE35 698 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 GEMIN6Q8WXD5 167 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 YIPF5Q969M3 257 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 NMD3Q96D46 503 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 NARFLQ9H6Q4 476 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF275Q9NSD4 429 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 RHCGQ9UBD6 479 aa13.85□□□□□ -0.19
CLSTN3-204ENST00000535313 IGKV1D-43A0A0B4J1Z2 117 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 A6NIZ1 184 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 EFCAB9A8MZ26 197 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 CXCR6O00574 342 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 CCDC22O60826 627 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 IGHMP01871 453 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 TFP02787 698 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 COX4I1P13073 169 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF32P17041 273 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 MAKP20794 623 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 MAGEB1P43366 347 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 GDI2P50395 445 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 DVL1P1P54792 670 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 RAP1BP61224 184 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms