RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PRKCDQ05655 676 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 FXNQ16595 210 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 HIST3H3Q16695 136 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 NKPD1Q17RQ9 610 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 TBC1D28Q2M2D7 210 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 PABPC1L2AQ5JQF8 200 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 FGD3Q5JSP0 725 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 C10orf128Q5T292 105 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 RGS7BPQ6MZT1 257 aaPredicted RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 C8orf82Q6P1X6 216 aaPredicted RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 DPPA2Q7Z7J5 298 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 OAFQ86UD1 273 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 HIPK1Q86Z02 1210 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 OR1J2Q8NGS2 313 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 LIPHQ8WWY8 451 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 ACOT11Q8WXI4 607 aaPredicted RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 TSPAN32Q96QS1 320 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 RBP7Q96R05 134 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 BEX2Q9BXY8 128 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 LRMDAQ9H2I8 198 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 RPS6KA6Q9UK32 745 aa8.98□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF346Q9UL40 294 aaKnown RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 FAM32AQ9Y421 112 aaKnown RBP8.98□□□□□ -0.97
CAPN1-225ENST00000533704 COL6A5A8TX70 2615 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 A0A087WUU8 490 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 HTR3EA5X5Y0 456 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 A6NIZ1 184 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 CLPTM1O96005 669 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 IGFBP1P08833 259 aaPredicted RBP8.97□□□□□ -0.97
CAPN1-225ENST00000533704 TSPAN19P0C672 248 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 NAT2P11245 290 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 NR2C1P13056 603 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF32P17041 273 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 DRD4P21917 467 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 GUCA1AP43080 201 aaPredicted RBP8.97□□□□□ -0.97
CAPN1-225ENST00000533704 SELENOVP59797 346 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 RAP1BP61224 184 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ERVS71-1P61550 626 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 RAP1AP62834 184 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ERVK-25P63136 954 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 GNGT1P63211 74 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 MRPS34P82930 218 aaKnown RBP8.97□□□□□ -0.97
CAPN1-225ENST00000533704 GLO1Q04760 184 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 TAF11Q15544 211 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 GLYATQ6IB77 296 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 IL17RELQ6ZVW7 336 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 MBOAT2Q6ZWT7 520 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ARIH2OSQ8N7S6 290 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 FAM156AQ8NDB6 213 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ZNF540Q8NDQ6 660 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 AKR7LQ8NHP1 331 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 FAM46AQ96IP4 442 aaKnown RBP8.97□□□□□ -0.97
CAPN1-225ENST00000533704 SNX18Q96RF0 628 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 SEPHS2Q99611 448 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 MDFIQ99750 246 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ALG12Q9BV10 488 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 MYLK2Q9H1R3 596 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 MS4A5Q9H3V2 200 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 C1orf198Q9H425 327 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 SIAEQ9HAT2 523 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 SPAG4Q9NPE6 437 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 TAAR3PQ9P1P4 343 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 KCNS2Q9ULS6 477 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 UGT2A1Q9Y4X1 527 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ENPP4Q9Y6X5 453 aa8.97□□□□□ -0.97
CAPN1-225ENST00000533704 ANK3Q12955 4377 aaKnown RBP8.96□□□□□ -0.97
CAPN1-225ENST00000533704 SLC22A23A1A5C7 686 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 GMNCA6NCL1 334 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NPIPB13A6NJU9 1138 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NPIPB4C9JG80 1138 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 SNX3O60493 162 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 LMX1BO60663 402 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 DIRAS1O95057 198 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 TGFAP01135 160 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 IFNA2P01563 188 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 HPXP02790 462 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 H1F0P07305 194 aaKnown RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 MMP7P09237 267 aaPredicted RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF23P17027 643 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 STOMP27105 288 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 LAP3P28838 519 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 PRDX6P30041 224 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 RAD52P43351 418 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 SLC9A3P48764 834 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 EVX1P49640 407 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 GDI2P50395 445 aaKnown RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF133P52736 654 aaPredicted RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 KLF3P57682 345 aaPredicted RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 CCNIQ14094 377 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 KRT72Q14CN4 511 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 TRIP10Q15642 601 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 NRN1LQ496H8 165 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 THEM4Q5T1C6 240 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 FAM205BPQ63HN1 556 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 FAM166AQ6J272 317 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 PODNL1Q6PEZ8 512 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 SLC25A47Q6Q0C1 308 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 RNF113BQ8IZP6 322 aaKnown RBP8.96□□□□□ -0.98
CAPN1-225ENST00000533704 ZNF786Q8N393 782 aa8.96□□□□□ -0.98
CAPN1-225ENST00000533704 LRRC75AQ8NAA5 344 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms