RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 LILRA1O75019 489 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 HNF1AP20823 631 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 CCNOP22674 350 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 IGFBP5P24593 272 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 APEX1P27695 318 aaKnown RBP13.26□□□□□ -0.29
CPSF1-211ENST00000533492 CDAP32320 146 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF133P52736 654 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-211ENST00000533492 UCP2P55851 309 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 RPL27P61353 136 aaKnown RBP13.26□□□□□ -0.29
CPSF1-211ENST00000533492 MRPS34P82930 218 aaKnown RBP13.26□□□□□ -0.29
CPSF1-211ENST00000533492 RIN1Q13671 783 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF730Q6ZMV8 503 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 CBLL1Q75N03 491 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 OAFQ86UD1 273 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 RNF113BQ8IZP6 322 aaKnown RBP13.26□□□□□ -0.29
CPSF1-211ENST00000533492 OFCC1Q8IZS5 231 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 PAQR4Q8N4S7 273 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-211ENST00000533492 ICA1LQ8NDH6 482 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 SYNPRQ8TBG9 265 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 FNDC8Q8TC99 324 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 FAM162AQ96A26 154 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 SNX18Q96RF0 628 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 ALG12Q9BV10 488 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 BCL2L14Q9BZR8 327 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 SMURF2Q9HAU4 748 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 TAAR3PQ9P1P4 343 aa13.26□□□□□ -0.29
CPSF1-211ENST00000533492 FBN1P35555 2871 aaKnown RBP13.26□□□□□ -0.29
CPSF1-211ENST00000533492 EFCAB9A8MZ26 197 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 NME4O00746 187 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 SNAP29O95721 258 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 SERPINA1P01009 418 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 HPXP02790 462 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 MMP7P09237 267 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-211ENST00000533492 TACSTD2P09758 323 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 NAT2P11245 290 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 SRD5A1P18405 259 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 MAKP20794 623 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 GSK3BP49841 420 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 NUDT2P50583 147 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 KLF3P57682 345 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-211ENST00000533492 PRKCDQ05655 676 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 FMODQ06828 376 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 ALKBH6Q3KRA9 238 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 ANKDD1AQ495B1 522 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 PABPC1L2AQ5JQF8 200 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 FAM120AOSQ5T036 256 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 FAM205BPQ63HN1 556 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 SLC25A47Q6Q0C1 308 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 IGFN1Q86VF2 1251 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 CYP4Z1Q86W10 505 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 MEX3DQ86XN8 651 aaKnown RBP13.25□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF519Q8TB69 540 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 SNX33Q8WV41 574 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 ACOT11Q8WXI4 607 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-211ENST00000533492 RDH5Q92781 318 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 HPS1Q92902 700 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 KCTD14Q9BQ13 255 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-211ENST00000533492 SLCO1C1Q9NYB5 712 aa13.25□□□□□ -0.29
CPSF1-211ENST00000533492 TRAV27A0A087WT01 109 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 IGKV1D-43A0A0B4J1Z2 117 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 A6NIZ1 184 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 CLPTM1O96005 669 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 ZNF32P17041 273 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 DRD4P21917 467 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 FUT4P22083 530 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 ACHEP22303 614 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 COL8A2P25067 703 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 STOMP27105 288 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 GPR6P46095 362 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-211ENST00000533492 SLC9A3P48764 834 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 RAP1BP61224 184 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 RAP1AP62834 184 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 TRIP10Q15642 601 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 MOGQ16653 247 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 ELFN2Q5R3F8 820 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 TMEM154Q6P9G4 183 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 HACD2Q6Y1H2 254 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 TREML1Q86YW5 311 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 ALDH16A1Q8IZ83 802 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 LINC01356Q8N9X3 169 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 CPEB3Q8NE35 698 aaKnown RBP13.24□□□□□ -0.29
CPSF1-211ENST00000533492 OR1J1Q8NGS3 322 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 TMEM158Q8WZ71 300 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 NMD3Q96D46 503 aaKnown RBP13.24□□□□□ -0.29
CPSF1-211ENST00000533492 CMTM5Q96DZ9 223 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 HSH2DQ96JZ2 352 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 ELAC2Q9BQ52 826 aaKnown RBP13.24□□□□□ -0.29
CPSF1-211ENST00000533492 SOX7Q9BT81 388 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 MAN2C1Q9NTJ4 1040 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 EIF3KQ9UBQ5 218 aaKnown RBP13.24□□□□□ -0.29
CPSF1-211ENST00000533492 FAM32AQ9Y421 112 aaKnown RBP13.24□□□□□ -0.29
CPSF1-211ENST00000533492 UGT2A1Q9Y4X1 527 aa13.24□□□□□ -0.29
CPSF1-211ENST00000533492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.24□□□□□ -0.293e-8■■□□□ 13.9
CPSF1-211ENST00000533492 A0A087WUU8 490 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 FFAR1O14842 300 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 GMNNO75496 209 aa13.23□□□□□ -0.29
CPSF1-211ENST00000533492 IGHMP01871 453 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms