RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 ERVK-18Q9QC07 812 aa13.05□□□□□ -0.32
NXF1-214ENST00000533048 COA3Q9Y2R0 106 aaPredicted RBP13.05□□□□□ -0.32
NXF1-214ENST00000533048 A0A087WXM4 84 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 FAM171A2A8MVW0 826 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 E9PLN8 166 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 IL2RAP01589 272 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 TFP02787 698 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 STSP08842 583 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 ADRA2AP08913 450 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 TMIGD3P0DMS9 266 aaPredicted RBP13.04□□□□□ -0.32
NXF1-214ENST00000533048 CA7P43166 264 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 ACTC1P68032 377 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 ACTA1P68133 377 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 MRPS34P82930 218 aaKnown RBP13.04□□□□□ -0.32
NXF1-214ENST00000533048 MVKQ03426 396 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 LYPD4Q6UWN0 246 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 STX19Q8N4C7 294 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 ZNF511Q8NB15 262 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 OR4F15Q8NGB8 312 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 ALKBH3Q96Q83 286 aaPredicted RBP13.04□□□□□ -0.32
NXF1-214ENST00000533048 DMRTA2Q96SC8 542 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 INTS14Q96SY0 518 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 MNTQ99583 582 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 VKORC1Q9BQB6 163 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 ZNF649Q9BS31 505 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 SFXN3Q9BWM7 321 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 YIPF3Q9GZM5 350 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 CRLF2Q9HC73 371 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 GPR35Q9HC97 309 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 KCNG2Q9UJ96 466 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 TINAGQ9UJW2 476 aa13.04□□□□□ -0.32
NXF1-214ENST00000533048 ZNF587BE7ETH6 402 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 SELENOFO60613 162 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 IL18BPO95998 194 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 CGAP01215 116 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 MT-ND2P03891 347 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 OR2T7P0C7T2 308 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 C21orf33P30042 268 aaPredicted RBP13.03□□□□□ -0.32
NXF1-214ENST00000533048 ZNF84P51523 738 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
NXF1-214ENST00000533048 FOXF2Q12947 444 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 TBCEQ15813 527 aaPredicted RBP13.03□□□□□ -0.32
NXF1-214ENST00000533048 FBXW9Q5XUX1 488 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
NXF1-214ENST00000533048 CDC20BQ86Y33 519 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 ZNF100Q8IYN0 542 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 SPARTQ8N0X7 666 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 ACBD7Q8N6N7 88 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 OR2T27Q8NH04 317 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 NSMAFQ92636 917 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 NABP1Q96AH0 204 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 MRPS26Q9BYN8 205 aaKnown RBP13.03□□□□□ -0.32
NXF1-214ENST00000533048 NELFAQ9H3P2 528 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 RERGLQ9H628 205 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 POLE4Q9NR33 117 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 PLSCR4Q9NRQ2 329 aa13.03□□□□□ -0.32
NXF1-214ENST00000533048 EXOSC1Q9Y3B2 195 aaKnown RBP13.03□□□□□ -0.32
NXF1-214ENST00000533048 TVP23AA6NH52 213 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 ZNF99A8MXY4 864 aaPredicted RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 APOL3O95236 402 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 GPANK1O95872 356 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 LIMS3P0CW19 117 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 LIMS4P0CW20 117 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 CD8BP10966 210 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 PCMT1P22061 227 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 ATP6V1E1P36543 226 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 NAA10P41227 235 aaPredicted RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 ENTPD1P49961 510 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 CASP6P55212 293 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 PER3P56645 1201 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 LSM6P62312 80 aaKnown RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 PIGFQ07326 219 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 CEACAM16Q2WEN9 425 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 VWA1Q6PCB0 445 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 C3P1Q6ZMU1 363 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 SHFQ7M4L6 423 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 ERI1Q8IV48 349 aaKnown RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 SLC35F2Q8IXU6 374 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 SVOPQ8N4V2 548 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 OTOSQ8NHW6 89 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 STARD4Q96DR4 205 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 ZNF837Q96EG3 531 aaPredicted RBP13.02□□□□□ -0.33
NXF1-214ENST00000533048 WDR76Q9H967 626 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 TMEM38BQ9NVV0 291 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 ERVK13-1Q9NX77 482 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 PRSS50Q9UI38 385 aa13.02□□□□□ -0.33
NXF1-214ENST00000533048 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
NXF1-214ENST00000533048 KALRNO60229 2985 aa13.01□□□□□ -0.33
NXF1-214ENST00000533048 A0A1W2PPL8 197 aa13.01□□□□□ -0.33
NXF1-214ENST00000533048 TMEM129A0AVI4 362 aa13.01□□□□□ -0.33
NXF1-214ENST00000533048 HSPB2A8KAH6 182 aa13.01□□□□□ -0.33
NXF1-214ENST00000533048 C12orf71A8MTZ7 269 aa13.01□□□□□ -0.33
NXF1-214ENST00000533048 MPZL1O95297 269 aa13.01□□□□□ -0.33
NXF1-214ENST00000533048 IGHV3-9P01782 118 aa13.01□□□□□ -0.33
NXF1-214ENST00000533048 HLA-DQA2P01906 255 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms