RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 KRCC1Q9NPI7 259 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 VSX1Q9NZR4 365 aaPredicted RBP12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 GRHPRQ9UBQ7 328 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 MED13LQ71F56 2210 aa12.09□□□□□ -0.47
TSPAN4-220ENST00000532375 IGHV2OR16-5A0A0B4J2B6 119 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 DCTN6O00399 190 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 MGRN1O60291 552 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 STAMBPO95630 424 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 PPP1R3DO95685 299 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 CST1P01037 141 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 CD79AP11912 226 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 ZNF35P13682 527 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 CTLA4P16410 223 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 HOXB6P17509 224 aaKnown RBP12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 TTKP33981 857 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 ZNF84P51523 738 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 CDH11P55287 796 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 DBPQ10586 325 aaPredicted RBP12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 KRR1Q13601 381 aaKnown RBP12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 CCNIQ14094 377 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 GK3PQ14409 553 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 GSG1Q2KHT4 349 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 MST1LQ2TV78 715 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 C11orf71Q6IPW1 123 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 CD300LDQ6UXZ3 194 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 RASSF6Q6ZTQ3 369 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 AQP11Q8NBQ7 271 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 FANK1Q8TC84 345 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 NSMAFQ92636 917 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 FBXO17Q96EF6 278 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 DUS3LQ96G46 650 aaKnown RBP12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 EGLN3Q9H6Z9 239 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 LAMP3Q9UQV4 416 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 F8P00451 2351 aa12.08□□□□□ -0.48
TSPAN4-220ENST00000532375 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 BHLHE40O14503 412 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 SOCS2O14508 198 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 TMCC2O75069 709 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 UBL3O95164 117 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 SERPINA5P05154 406 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 SLC6A6P31641 620 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 CAPZA2P47755 286 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 NKX6-1P78426 367 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 CBX1P83916 185 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 ENDOGQ14249 297 aaKnown RBP12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 RAB39AQ14964 217 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 HS3ST5Q8IZT8 346 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 LRRC75A-AS1Q8N1F1 130 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 OR10G2Q8NGC3 310 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 ERMAPQ96PL5 475 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 FEVQ99581 238 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 CCL19Q99731 98 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 NIPSNAP1Q9BPW8 284 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 GSX2Q9BZM3 304 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 SYT4Q9H2B2 425 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 REV1Q9UBZ9 1251 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 CDH10Q9Y6N8 788 aa12.07□□□□□ -0.48
TSPAN4-220ENST00000532375 IDH3BO43837 385 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 CRYAAP02489 173 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 NR2C1P13056 603 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 HIST1H1CP16403 213 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 NPR2P20594 1047 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 LAP3P28838 519 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 PTDSS1P48651 473 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 RPS6KA3P51812 740 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 ADAM8P78325 824 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 NPRL3Q12980 569 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 SWI5Q1ZZU3 235 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 ZNF544Q6NX49 715 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 UGT2A3Q6UWM9 527 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 DPPA2Q7Z7J5 298 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 ADCK1Q86TW2 530 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 DEPDC4Q8N2C3 294 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 LRRC18Q8N456 261 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 IL17RDQ8NFM7 739 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 GIPC3Q8TF64 312 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 NANOS1Q8WY41 292 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 GTPBP3Q969Y2 492 aaKnown RBP12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 TSSK2Q96PF2 358 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 SNX18Q96RF0 628 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 NUAK2Q9H093 628 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 POLE4Q9NR33 117 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 DNAJB9Q9UBS3 223 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
TSPAN4-220ENST00000532375 IGLV1-36A0A0B4J1U3 117 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 OR6C68A6NDL8 312 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 XKRYO14609 159 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 TIPRLO75663 272 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 FARS2O95363 451 aaKnown RBP12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 CST2P09228 141 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 ZNF32P17041 273 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 APOBEC3AP31941 199 aaPredicted RBP12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 PTH2RP49190 550 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 COX10Q12887 443 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 SGCAQ16586 387 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 CCDC121Q6ZUS5 278 aa12.05□□□□□ -0.48
TSPAN4-220ENST00000532375 SLC16A14Q7RTX9 510 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms