RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
CCS-206ENST00000530961 SLC22A24Q8N4F4 322 aa13.36□□□□□ -0.27
CCS-206ENST00000530961 OR52E2Q8NGJ4 325 aa13.36□□□□□ -0.27
CCS-206ENST00000530961 NMNAT3Q96T66 252 aa13.36□□□□□ -0.27
CCS-206ENST00000530961 RBM4BQ9BQ04 359 aaKnown RBP13.36□□□□□ -0.27
CCS-206ENST00000530961 RBM4Q9BWF3 364 aaKnown RBP13.36□□□□□ -0.27
CCS-206ENST00000530961 KLHL21Q9UJP4 597 aa13.36□□□□□ -0.27
CCS-206ENST00000530961 UGT2A1Q9Y4X1 527 aa13.36□□□□□ -0.27
CCS-206ENST00000530961 MED12LQ86YW9 2145 aa13.36□□□□□ -0.27
CCS-206ENST00000530961 ARHGAP21Q5T5U3 1957 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.35□□□□□ -0.27
CCS-206ENST00000530961 SIAH2O43255 324 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 SLC16A7O60669 478 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 SEC14L2O76054 403 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 UBL3O95164 117 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 HMGN1P05114 100 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 CBR1P16152 277 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 PTAFRP25105 342 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 GRK5P34947 590 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 ARR3P36575 388 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 CAPZA2P47755 286 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCS-206ENST00000530961 PGGHGQ32M88 737 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 NCMAPQ5T1S8 102 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 FOXL2NBQ6ZUU3 175 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 SKA3Q8IX90 412 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 OR4Q3Q8NH05 313 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 PIK3IP1Q96FE7 263 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 PLPPR2Q96GM1 343 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 RADILQ96JH8 1075 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 NUAK2Q9H093 628 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 KCNN2Q9H2S1 579 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 CLEC4MQ9H2X3 399 aaPredicted RBP13.35□□□□□ -0.27
CCS-206ENST00000530961 KRT84Q9NSB2 600 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 B3GNT2Q9NY97 397 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 NPAP1Q9NZP6 1156 aa13.35□□□□□ -0.27
CCS-206ENST00000530961 CRNNQ9UBG3 495 aaPredicted RBP13.35□□□□□ -0.27
CCS-206ENST00000530961 TACC2O95359 2948 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 SAC3D1A6NKF1 404 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 RIIAD1A6NNX1 92 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 BAG2O95816 211 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 CTLA4P16410 223 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 ZNF3P17036 446 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 ZNF83P51522 516 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 CRISP1P54107 249 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 PPP2R2BQ00005 443 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 CDK5Q00535 292 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 GINS1Q14691 196 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 GSG1Q2KHT4 349 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 SLC36A2Q495M3 483 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 ZNF362Q5T0B9 420 aaPredicted RBP13.34□□□□□ -0.27
CCS-206ENST00000530961 SLC16A14Q7RTX9 510 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 TMEM200AQ86VY9 491 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 GLB1L2Q8IW92 636 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 DDOQ99489 341 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 WACQ9BTA9 647 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 C1QTNF6Q9BXI9 259 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 SEC61A2Q9H9S3 476 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 CMC2Q9NRP2 79 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 B9D1Q9UPM9 204 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 FKBP7Q9Y680 259 aa13.34□□□□□ -0.27
CCS-206ENST00000530961 OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 DPRXA6NFQ7 191 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 IGKV3-15P01624 115 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 IGLV1-44P01699 117 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 HLA-HP01893 362 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 CD3EP07766 207 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 CD79AP11912 226 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 MSR1P21757 451 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 IGFBP5P24593 272 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 CD40P25942 277 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 LOXP28300 417 aaPredicted RBP13.33□□□□□ -0.28
CCS-206ENST00000530961 LAP3P28838 519 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 CDAP32320 146 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 RAB1AP62820 205 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 ETFDHQ16134 617 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 SGCAQ16586 387 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 MDP1Q86V88 176 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 OR6V1Q8N148 313 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 SDR9C7Q8NEX9 313 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 IL17RDQ8NFM7 739 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 OR2T4Q8NH00 348 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 NABP1Q96AH0 204 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 SH3GL3Q99963 347 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 TMEM204Q9BSN7 226 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 C9orf16Q9BUW7 83 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 RACGAP1Q9H0H5 632 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 RERGLQ9H628 205 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 SLC25A19Q9HC21 320 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
CCS-206ENST00000530961 RPRD1BQ9NQG5 326 aaKnown RBP13.33□□□□□ -0.28
CCS-206ENST00000530961 POLE4Q9NR33 117 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 USE1Q9NZ43 259 aa13.33□□□□□ -0.28
CCS-206ENST00000530961 COA3Q9Y2R0 106 aaPredicted RBP13.33□□□□□ -0.28
CCS-206ENST00000530961 INTS1Q8N201 2190 aaKnown RBP13.32□□□□□ -0.28
CCS-206ENST00000530961 A0A1W2PPL8 197 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 286.4 ms