RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 INTS12Q96CB8 462 aaKnown RBP13.65□□□□□ -0.22
USP47-207ENST00000527733 SLC5A7Q9GZV3 580 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 SIAEQ9HAT2 523 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 HIF3AQ9Y2N7 669 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 PMF1-BGLAPU3KQ54 211 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 UPK1BO75841 260 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 ZNF766Q5HY98 468 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 NPSR1Q6W5P4 371 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 STEAP2Q8NFT2 490 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 OR8H1Q8NGG4 311 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 TAAR8Q969N4 342 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 SLAMF6Q96DU3 332 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 DNAJB11Q9UBS4 358 aa13.65□□□□□ -0.22
USP47-207ENST00000527733 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
USP47-207ENST00000527733 IGHV3-15A0A0B4J1V0 119 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 ARPC3O15145 178 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 FZD7O75084 574 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 NCR1O76036 304 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 SLC2A1P11166 492 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 HCCSP53701 268 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 SFXN4Q6P4A7 337 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 FGF20Q9NP95 211 aaPredicted RBP13.64□□□□□ -0.23
USP47-207ENST00000527733 ITGB1BP2Q9UKP3 347 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 A0A1B0GVC2 190 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 A0A1W2PQD3 144 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 A6NIN4 97 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 CYC1P08574 325 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 ANKRD34CP0C6C1 535 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 BEST3Q8N1M1 668 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 EXD3Q8N9H8 876 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 THAP7Q9BT49 309 aaPredicted RBP13.64□□□□□ -0.23
USP47-207ENST00000527733 DNTTIP1Q9H147 329 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 B9D1Q9UPM9 204 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 TRAPPC2LH3BP13 241 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 DHHO43323 396 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 PRSS23O95084 383 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 WNT11O96014 354 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 CT45A8P0DMV1 189 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 CT45A9P0DMV2 189 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 CSF2RBP32927 897 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 EIF5AP63241 154 aaKnown RBP13.64□□□□□ -0.23
USP47-207ENST00000527733 GPR176Q14439 515 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 CT45A2Q5DJT8 189 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 CD300LDQ6UXZ3 194 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 USP51Q70EK9 711 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 VASH2Q86V25 355 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 FGGYQ96C11 551 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 TP63Q9H3D4 680 aaPredicted RBP13.64□□□□□ -0.23
USP47-207ENST00000527733 EXO1Q9UQ84 846 aaKnown RBP13.64□□□□□ -0.23
USP47-207ENST00000527733 TIMM10BQ9Y5J6 103 aa13.64□□□□□ -0.23
USP47-207ENST00000527733 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 TRGV5A0A0B4J1U4 118 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 RAB3DO95716 219 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 SNRPBP14678 240 aaKnown RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 PVALBP20472 110 aaPredicted RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 CD82P27701 267 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 HTR2CP28335 458 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 PLEKHN1Q494U1 663 aaPredicted RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 ZNF679Q8IYX0 411 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 ZNF321PQ8N8H1 164 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 OR4Q3Q8NH05 313 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 TRIB1Q96RU8 372 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 NUDT15Q9NV35 164 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 RHBDD3Q9Y3P4 386 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 PCM1Q15154 2024 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 PMS2P1A4D2B8 440 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 YES1P07947 543 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 MSL3P1P0C860 447 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 SERPINA2P20848 420 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 PTH2RP49190 550 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 WDR88Q6ZMY6 472 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 COX15Q7KZN9 410 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 METTL9Q9H1A3 318 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 ISYNA1Q9NPH2 558 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 NAP1L6A6NFF2 107 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 CSF1P09603 554 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 RPS27P42677 84 aaKnown RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 GP2P55259 537 aaKnown RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 CLDN12P56749 244 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 CDK5Q00535 292 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 FAPQ12884 760 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 CD226Q15762 336 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 CORO6Q6QEF8 472 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 PGAP1Q75T13 922 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 FOXRED2Q8IWF2 684 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 OR11G2Q8NGC1 345 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 ROBO4Q8WZ75 1007 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 TBCCD1Q9NVR7 557 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 KCNG2Q9UJ96 466 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 KCNS2Q9ULS6 477 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 CRYABP02511 175 aaKnown RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
USP47-207ENST00000527733 ACHEP22303 614 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 GABRR1P24046 479 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 PTPN6P29350 595 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 GZMMP51124 257 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 RIPPLY1Q0D2K3 151 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 PXKQ7Z7A4 578 aa13.63□□□□□ -0.23
USP47-207ENST00000527733 ZAR1Q86SH2 424 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms