RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ABCD2Q9UBJ2 740 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC7A8Q9UHI5 535 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 DUSP13Q9UII6 198 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 FBXO9Q9UK97 447 aaPredicted RBP8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 FBXL3Q9UKT7 428 aa8.95□□□□□ -0.98
PRPF40B-204ENST00000527253 LOC100509620A0A075B734 347 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 LOC100289279A0A1B0GTE1 492 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 HTR3EA5X5Y0 456 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 EFCAB9A8MZ26 197 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 M0R233 179 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 LMX1BO60663 402 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 NCR1O76036 304 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 IGHMP01871 453 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 TACSTD2P09758 323 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 NAT2P11245 290 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF32P17041 273 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 APEX1P27695 318 aaKnown RBP8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 ERVK-25P63136 954 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 PSG4Q00888 419 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 GALK2Q01415 458 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 SGCAQ16586 387 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 ALKBH6Q3KRA9 238 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC36A2Q495M3 483 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 TMEM255AQ5JRV8 349 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 FOXL2NBQ6ZUU3 175 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 IL17RELQ6ZVW7 336 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 MBOAT2Q6ZWT7 520 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 FKBP9P1Q75LS8 142 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM86B1Q8N7N1 296 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 AKR7LQ8NHP1 331 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 ACOT11Q8WXI4 607 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 GTF3AQ92664 365 aaKnown RBP8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 YIPF5Q969M3 257 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 KCTD14Q9BQ13 255 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 ALG12Q9BV10 488 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 NMNAT1Q9HAN9 279 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 SMURF2Q9HAU4 748 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 EGFL7Q9UHF1 273 aa8.94□□□□□ -0.98
PRPF40B-204ENST00000527253 IGLV3-9A0A075B6K5 115 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 H7C1C5 153 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 WNT9BO14905 357 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ATP8B1O43520 1251 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 SNX3O60493 162 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ENTPD5O75356 428 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 PTP4A3O75365 173 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 SNAP29O95721 258 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM157CP0CG43 387 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 SAGP10523 405 aaPredicted RBP8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF250P15622 560 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 LAP3P28838 519 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 PRDX6P30041 224 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 WNT5AP41221 380 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 MAGEB1P43366 347 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 GPR4P46093 362 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 GYS2P54840 703 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 UCP2P55851 309 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 RPS23P62266 143 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 LCN6P62502 163 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 CD47Q08722 323 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ENDOGQ14249 297 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 TAF11Q15544 211 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM27BQ5VT28 67 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 GLYATQ6IB77 296 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 RGS7BPQ6MZT1 257 aaPredicted RBP8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 PODNL1Q6PEZ8 512 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 UGT2A3Q6UWM9 527 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF730Q6ZMV8 503 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 TMPRSS11FQ6ZWK6 438 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 CXXC5Q7LFL8 322 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 HDDC2Q7Z4H3 204 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 OAFQ86UD1 273 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 RNF113BQ8IZP6 322 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 RNF148Q8N7C7 305 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM156AQ8NDB6 213 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ZNF540Q8NDQ6 660 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC7A13Q8TCU3 470 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM162AQ96A26 154 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 POM121L2Q96KW2 1035 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 C7orf34Q96L11 122 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 FAM107BQ9H098 131 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 WNT5BQ9H1J7 359 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 MS4A5Q9H3V2 200 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 CHODLQ9H9P2 273 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 CDH20Q9HBT6 801 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 NDUFAF4Q9P032 175 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 TAAR3PQ9P1P4 343 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 STX18Q9P2W9 335 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 CDC42EP3Q9UKI2 254 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ADAM18Q9Y3Q7 739 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 ENPP4Q9Y6X5 453 aa8.93□□□□□ -0.98
PRPF40B-204ENST00000527253 IQCMA0A1B0GVH7 501 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 A0A1W2PPW3 197 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 SLC22A23A1A5C7 686 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 IMPA2O14732 288 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 DIRAS1O95057 198 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 TGFAP01135 160 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 LCKP06239 509 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 ERCC1P07992 297 aaPredicted RBP8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 STOMP27105 288 aa8.92□□□□□ -0.98
PRPF40B-204ENST00000527253 IFNA8P32881 189 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms