RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 MARVELD3Q96A59 401 aa18.14■□□□□ 0.49
CD44-222ENST00000526025 NABP1Q96AH0 204 aa18.14■□□□□ 0.49
CD44-222ENST00000526025 ZC3HAV1LQ96H79 300 aaKnown RBP18.14■□□□□ 0.49
CD44-222ENST00000526025 WACQ9BTA9 647 aa18.14■□□□□ 0.49
CD44-222ENST00000526025 NUAK2Q9H093 628 aa18.14■□□□□ 0.49
CD44-222ENST00000526025 CRNNQ9UBG3 495 aaPredicted RBP18.14■□□□□ 0.49
CD44-222ENST00000526025 HEATR1Q9H583 2144 aaKnown RBP18.14■□□□□ 0.49
CD44-222ENST00000526025 NBPF19A0A087WUL8 3843 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 A0A096LPE4 126 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 IGLV1-36A0A0B4J1U3 117 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 A0A1W2PPZ6 126 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 ZAR1LA6NP61 321 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 DEFB108AA8MXU0 73 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 UBL3O95164 117 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 SSTR2P30874 369 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 NPRL3Q12980 569 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 FAM27BQ5VT28 67 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 ZBTB49Q6ZSB9 765 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 WFDC8Q8IUA0 241 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 GLB1L2Q8IW92 636 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 ZNF295-AS1Q8N0V1 137 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 IQCF1Q8N6M8 205 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 SLC38A2Q96QD8 506 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 NMNAT2Q9BZQ4 307 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 B3GNT2Q9NY97 397 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 FBXL3Q9UKT7 428 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 B9D1Q9UPM9 204 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 CRYBG3Q68DQ2 2970 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 CADP27708 2225 aa18.13■□□□□ 0.49
CD44-222ENST00000526025 CASQ2O14958 399 aaPredicted RBP18.12■□□□□ 0.49
CD44-222ENST00000526025 SURF4O15260 269 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 SEC14L2O76054 403 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 IGKV3-15P01624 115 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 LAP3P28838 519 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 PTDSS1P48651 473 aaKnown RBP18.12■□□□□ 0.49
CD44-222ENST00000526025 KCNMB1Q16558 191 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 SLX4IPQ5VYV7 408 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 OR6V1Q8N148 313 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 PACRGLQ8N7B6 248 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 OR2T4Q8NH00 348 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 RDH12Q96NR8 316 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 RPRD1BQ9NQG5 326 aaKnown RBP18.12■□□□□ 0.49
CD44-222ENST00000526025 POLE4Q9NR33 117 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 ZNF224Q9NZL3 707 aa18.12■□□□□ 0.49
CD44-222ENST00000526025 H0YHG0 523 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 IGLV1-44P01699 117 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 CST2P09228 141 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 CBR1P16152 277 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 MSR1P21757 451 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 PAICSP22234 425 aaKnown RBP18.11■□□□□ 0.49
CD44-222ENST00000526025 ARR3P36575 388 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 CENPAP49450 140 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 GLO1Q04760 184 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 CRMP1Q14194 572 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 SLC36A2Q495M3 483 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 SYT9Q86SS6 491 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 SKA3Q8IX90 412 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 FN3KQ9H479 309 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 ESRP2Q9H6T0 727 aaKnown RBP18.11■□□□□ 0.49
CD44-222ENST00000526025 NPAP1Q9NZP6 1156 aa18.11■□□□□ 0.49
CD44-222ENST00000526025 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.1■□□□□ 0.49
CD44-222ENST00000526025 A0A1W2PPL8 197 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 E9PQ18 207 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 DCTN6O00399 190 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 SIAH2O43255 324 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 CTAG2O75638 210 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 HRGP04196 525 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 PTAFRP25105 342 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 LOXP28300 417 aaPredicted RBP18.1■□□□□ 0.49
CD44-222ENST00000526025 CDAP32320 146 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 BLVRAP53004 296 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 LSM6P62312 80 aaKnown RBP18.1■□□□□ 0.49
CD44-222ENST00000526025 TRIP10Q15642 601 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 ETFDHQ16134 617 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 GSG1Q2KHT4 349 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 NCMAPQ5T1S8 102 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 C12orf73Q69YU5 71 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 ZNF787Q6DD87 383 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 TMEM108Q6UXF1 575 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 SLC16A14Q7RTX9 510 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 CYB561A3Q8NBI2 242 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 TSSK2Q96PF2 358 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 SLC29A1Q99808 456 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 KCNN2Q9H2S1 579 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 SEC61A2Q9H9S3 476 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 RNPEPL1Q9HAU8 725 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 SRA1Q9HD15 236 aaKnown RBP18.1■□□□□ 0.49
CD44-222ENST00000526025 RASSF1Q9NS23 344 aa18.1■□□□□ 0.49
CD44-222ENST00000526025 COA3Q9Y2R0 106 aaPredicted RBP18.1■□□□□ 0.49
CD44-222ENST00000526025 A0A1W2PR80 420 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 ZNF503-AS2A6NEH8 195 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 HLA-HP01893 362 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 GAAP10253 952 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 EPHA2P29317 976 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 PCBD1P61457 104 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 RIPK1Q13546 671 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 SGCAQ16586 387 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 TMEM236Q5W0B7 351 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 HIST2H2BCQ6DN03 193 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 PLEKHA8Q96JA3 519 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms