RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	RAB40A	Q8WXH6	277 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CNOT9	Q92600	299 aa	Known RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NSMAF	Q92636	917 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CTHRC1	Q96CG8	243 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	HAVCR1	Q96D42	359 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZMYND19	Q96E35	227 aa	Predicted RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	RBM18	Q96H35	190 aa	Known RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	DERL3	Q96Q80	235 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR14A2	Q96R54	314 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	GPX7	Q96SL4	187 aa	Predicted RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	ARPC5L	Q9BPX5	153 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SEC22C	Q9BRL7	303 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SPRTN	Q9H040	489 aa	Predicted RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SHARPIN	Q9H0F6	387 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	PPA2	Q9H2U2	334 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CDCP1	Q9H5V8	836 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	LYRM4	Q9HD34	91 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	NOX4	Q9NPH5	578 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CA10	Q9NS85	328 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC39A1	Q9NY26	324 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	KLHL9	Q9P2J3	617 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	TBC1D29	Q9UFV1	150 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR5V1	Q9UGF6	321 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	PILRA	Q9UKJ1	303 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	DAPP1	Q9UN19	280 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	AK6	Q9Y3D8	172 aa	Known RBP	7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	HEBP2	Q9Y5Z4	205 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	CPAMD8	Q8IZJ3	1885 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	KNTC1	P50748	2209 aa		7.08	□□□□□ -1.28
SPIDR-223	ENST00000524033	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	UBR5	O95071	2799 aa	Predicted RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	TRBV5-7	A0A0A0MS05	114 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	GXYLT2	A0PJZ3	443 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	FAM221A	A4D161	298 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	MEGF11	A6BM72	1044 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR52A4P	A6NMU1	304 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZNF879	B4DU55	563 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ARPC1B	O15143	372 aa	Known RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ARPC3	O15145	178 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	SSNA1	O43805	119 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	SUSD5	O60279	629 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	CTNS	O60931	367 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	DNAJB6	O75190	326 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	NDUFB2	O95178	105 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	EML2	O95834	649 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	HIST1H2AB	P04908	130 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ALDOB	P05062	364 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	GYPB	P06028	91 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	FGF2	P09038	288 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	CT62	P0C5K7	136 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	VSIG10L2	P0DP72	767 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	SFTPC	P11686	197 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	HIST1H1C	P16403	213 aa	Known RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	EDNRA	P25101	427 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	EMD	P50402	254 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	RPS4X	P62701	263 aa	Known RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	HHEX	Q03014	270 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	TRMT12	Q53H54	448 aa	Known RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	PXDC1	Q5TGL8	231 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	FCRLB	Q6BAA4	426 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	FCRL6	Q6DN72	434 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	FBXO42	Q6P3S6	717 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	TMEM81	Q6P7N7	255 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	FAM198B	Q6UWH4	519 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	TFAP2E	Q6VUC0	442 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	HIST3H2A	Q7L7L0	130 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	LINGO2	Q7L985	606 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	REC114	Q7Z4M0	266 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	LRRTM1	Q86UE6	522 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZNF761	Q86XN6	746 aa	Predicted RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZNF595	Q8IYB9	648 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	CDK20	Q8IZL9	346 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	COX18	Q8N8Q8	333 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	NPEPL1	Q8NDH3	523 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	DNAAF1	Q8NEP3	725 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	SLC37A2	Q8TED4	501 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	PCNP	Q8WW12	178 aa	Known RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZNRF4	Q8WWF5	429 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	WFDC12	Q8WWY7	111 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	RSC1A1	Q92681	617 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	EXTL1	Q92935	676 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	HIST1H2AC	Q93077	130 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ELMOD3	Q96FG2	381 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	MRPL48	Q96GC5	212 aa	Known RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	LINC00052	Q96N35	136 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	SFXN2	Q96NB2	322 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ZFP3	Q96NJ6	502 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR2A5	Q96R48	311 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	TNFRSF13C	Q96RJ3	184 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	LMF2	Q9BU23	707 aa	Known RBP	7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	TRIM2	Q9C040	744 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	TMEM27	Q9HBJ8	222 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	POT1	Q9NUX5	634 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	SDHAF2	Q9NX18	166 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	OR6C2	Q9NZP2	312 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	ETV7	Q9Y603	341 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	MPDZ	O75970	2070 aa		7.07	□□□□□ -1.28
SPIDR-223	ENST00000524033	HEATR5A	Q86XA9	2040 aa		7.06	□□□□□ -1.28
SPIDR-223	ENST00000524033	KIR2DS5	A0A0G2JLQ3	304 aa		7.06	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 72 ms