RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CDK5Q00535 292 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 PMPCAQ10713 525 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 PGGHGQ32M88 737 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 MESTQ5EB52 335 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 C9orf135Q5VTT2 229 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 NIPAL3Q6P499 406 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CASP12Q6UXS9 341 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 SEM1Q6ZVN7 128 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CREB3L2Q70SY1 520 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 ZNF367Q7RTV3 350 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 PXKQ7Z7A4 578 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 NAXEQ8NCW5 288 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 OR9Q1Q8NGQ5 310 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 RNF128Q8TEB7 428 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 WBP1Q96G27 269 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 OXGR1Q96P68 337 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 TRAF3IP2O43734 574 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CYTIPO60759 359 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 SOX6P35712 828 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CDKN2AP42771 156 aaKnown RBP10.98□□□□□ -0.65
PABPC1-219ENST00000522387 DEFA1P59665 94 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 DEFA3P59666 94 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 FMODQ06828 376 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 MED22Q15528 200 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 SPANXN2Q5MJ10 180 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 DPY19L2P2Q6ZN68 376 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 SPATC1Q76KD6 591 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 FAM122BQ7Z309 247 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 FJX1Q86VR8 437 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CELF2-AS1Q8N7Q2 184 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 ZIC4Q8N9L1 334 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 ANKK1Q8NFD2 765 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 BBS1Q8NFJ9 593 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CAPSLQ8WWF8 208 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 HCAR1Q9BXC0 346 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 NUAK2Q9H093 628 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 SYT4Q9H2B2 425 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 MOV10Q9HCE1 1003 aaKnown RBP10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CLEC2DQ9UHP7 191 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 FLVCR1Q9Y5Y0 555 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 SPTBN1Q01082 2364 aaKnown RBP10.98□□□□□ -0.65
PABPC1-219ENST00000522387 CACNA1CQ13936 2221 aa10.98□□□□□ -0.65
PABPC1-219ENST00000522387 PNMA8CA0A1B0GUJ8 204 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 XKRYO14609 159 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 GPANK1O95872 356 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 APOA1P02647 267 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 TSPAN19P0C672 248 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 S100A1P23297 94 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 CRMP1Q14194 572 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 ETFDHQ16134 617 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 TSTQ16762 297 aaKnown RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 LEG1Q6P5S2 330 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 NUFIP2Q7Z417 695 aaKnown RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 ZNF486Q96H40 463 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 SRA1Q9HD15 236 aaKnown RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 RPRD1BQ9NQG5 326 aaKnown RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 PAQR5Q9NXK6 330 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 KLHL9Q9P2J3 617 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 NOSIPQ9Y314 301 aaKnown RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 CRYBG3Q68DQ2 2970 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 LOC110117498-PIK3R3F6TDL0 507 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 SDHAP31040 664 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 ETV6P41212 452 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 RPL27P61353 136 aaKnown RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 IFITM2Q01629 132 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 RBPJQ06330 500 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 KLHL12Q53G59 568 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 PLBD1Q6P4A8 553 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 VWA1Q6PCB0 445 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 LYPD4Q6UWN0 246 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 ZNF843Q8N446 348 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 LNX2Q8N448 690 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 OR6S1Q8NH40 331 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 CHAC2Q8WUX2 184 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 NSMAFQ92636 917 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 ALKBH3Q96Q83 286 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 KCNS3Q9BQ31 491 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 OR51V1Q9H2C8 321 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 TXNIPQ9H3M7 391 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 RNF122Q9H9V4 155 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 CLN6Q9NWW5 311 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 CLCF1Q9UBD9 225 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 RASD1Q9Y272 281 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 NOX1Q9Y5S8 564 aa10.97□□□□□ -0.65
PABPC1-219ENST00000522387 SPTAN1Q13813 2472 aaKnown RBP10.97□□□□□ -0.65
PABPC1-219ENST00000522387 IGKV1D-43A0A0B4J1Z2 117 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 A0A1W2PNV4 684 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 OR6C68A6NDL8 312 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 ZNF726A6NNF4 738 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 DCTN6O00399 190 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 SURF4O15260 269 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 C1QL1O75973 258 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 GNLYP22749 145 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 CENPAP49450 140 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.96□□□□□ -0.65
PABPC1-219ENST00000522387 NDUFA5Q16718 116 aa10.96□□□□□ -0.65
PABPC1-219ENST00000522387 RSBN1Q5VWQ0 802 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-219ENST00000522387 ABLIM2Q6H8Q1 611 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms