RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 THBS4P35443 961 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 IFNGR2P38484 337 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 HMGA2P52926 109 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 CHRNB3Q05901 458 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 DAG1Q14118 895 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 ETFDHQ16134 617 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 DNAL1Q4LDG9 190 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 KRT80Q6KB66 452 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 TMEM53Q6P2H8 277 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 SMARCD3Q6STE5 483 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 FANK1Q8TC84 345 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 LRGUKQ96M69 825 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 ZNF442Q9H7R0 627 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 RNF121Q9H920 327 aa17.86■□□□□ 0.45
TRIM35-203ENST00000521253 SLC22A23A1A5C7 686 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 PRSS37A4D1T9 235 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 H7C1Q1 480 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 H7C417 338 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 TNFRSF11BO00300 401 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 MGRN1O60291 552 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 MMP7P09237 267 aaPredicted RBP17.85■□□□□ 0.45
TRIM35-203ENST00000521253 NR4A1P22736 598 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 SDHAP31040 664 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 TRAP1Q12931 704 aaKnown RBP17.85■□□□□ 0.45
TRIM35-203ENST00000521253 SNTB2Q13425 540 aaKnown RBP17.85■□□□□ 0.45
TRIM35-203ENST00000521253 KRR1Q13601 381 aaKnown RBP17.85■□□□□ 0.45
TRIM35-203ENST00000521253 SGCAQ16586 387 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 CLEC12BQ2HXU8 276 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 FAM98BQ52LJ0 330 aaKnown RBP17.85■□□□□ 0.45
TRIM35-203ENST00000521253 GPR139Q6DWJ6 353 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 C1orf94Q6P1W5 598 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 PGBD2Q6P3X8 592 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 DPY19L2P2Q6ZN68 376 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 CIARTQ8N365 385 aaPredicted RBP17.85■□□□□ 0.45
TRIM35-203ENST00000521253 OR4C15Q8NGM1 316 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 POP5Q969H6 163 aaKnown RBP17.85■□□□□ 0.45
TRIM35-203ENST00000521253 C18orf12Q96KH6 178 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 BTBD10Q9BSF8 475 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 IER3IP1Q9Y5U9 82 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 ZANQ9Y493 2812 aa17.85■□□□□ 0.45
TRIM35-203ENST00000521253 AHCYL1O43865 530 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 STAMBPO95630 424 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 BMP4P12644 408 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 GSSP48637 474 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 EFNB3Q15768 340 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 RFX4Q33E94 735 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 PGM2L1Q6PCE3 622 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 FOXL2NBQ6ZUU3 175 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 COX4I2Q96KJ9 171 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 BDH2Q9BUT1 245 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 TRIM15Q9C019 465 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 OR52D1Q9H346 318 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 BARX1Q9HBU1 254 aaPredicted RBP17.84■□□□□ 0.45
TRIM35-203ENST00000521253 PMF1-BGLAPU3KQ54 211 aa17.84■□□□□ 0.45
TRIM35-203ENST00000521253 SETD2Q9BYW2 2564 aaPredicted RBP17.84■□□□□ 0.45
TRIM35-203ENST00000521253 A0A1W2PPL8 197 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 B9A039 149 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 SOCS2O14508 198 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 PPP1R3DO95685 299 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 TXNDC12O95881 172 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 LAP3P28838 519 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 RPS6KA3P51812 740 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 SNRPD2P62316 118 aaKnown RBP17.83■□□□□ 0.44
TRIM35-203ENST00000521253 PPP1R8Q12972 351 aaKnown RBP17.83■□□□□ 0.44
TRIM35-203ENST00000521253 TSPAN31Q12999 210 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 RAB35Q15286 201 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 FAM27BQ5VT28 67 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 ADGRG5Q8IZF4 528 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 SLC30A7Q8NEW0 376 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 OR9Q2Q8NGE9 314 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 GNPDA2Q8TDQ7 276 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 KCNN2Q9H2S1 579 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 GSX1Q9H4S2 264 aaPredicted RBP17.83■□□□□ 0.44
TRIM35-203ENST00000521253 VNN3Q9NY84 501 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 SPEF1Q9Y4P9 236 aa17.83■□□□□ 0.44
TRIM35-203ENST00000521253 AQP12BA6NM10 295 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 IMPA2O14732 288 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 SSX4O60224 188 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 GPRIN2O60269 458 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 INHBBP09529 407 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 RAP2AP10114 183 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 CCL2P13500 99 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 APEHP13798 732 aaKnown RBP17.82■□□□□ 0.44
TRIM35-203ENST00000521253 CTLA4P16410 223 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 ZNF32P17041 273 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 GUCA1AP43080 201 aaPredicted RBP17.82■□□□□ 0.44
TRIM35-203ENST00000521253 GALK2Q01415 458 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 PLP2Q04941 152 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 BNIP1Q12981 228 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 TNK1Q13470 666 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 PABPC1L2AQ5JQF8 200 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 OR2T5Q6IEZ7 315 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 ZNF770Q6IQ21 691 aaPredicted RBP17.82■□□□□ 0.44
TRIM35-203ENST00000521253 DNM1P46Q6ZS02 220 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 PTCHD4Q6ZW05 846 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 ADCK1Q86TW2 530 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 AQP12AQ8IXF9 295 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 PAQR4Q8N4S7 273 aaPredicted RBP17.82■□□□□ 0.44
TRIM35-203ENST00000521253 LINC00471Q8N535 108 aa17.82■□□□□ 0.44
TRIM35-203ENST00000521253 CPEB3Q8NE35 698 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms