RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 INSP01308 110 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 SERPINE2P07093 398 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACSM4P0C7M7 580 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CT45A6P0DMU7 189 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CT45A5P0DMU8 189 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CT45A7P0DMV0 189 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CALM1P0DP23 149 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CALM2P0DP24 149 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CALM3P0DP25 149 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZNF250P15622 560 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 STXBP1P61764 594 aaKnown RBP3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 NUTF2P61970 127 aaKnown RBP3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 RAB11AP62491 216 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 RAD51Q06609 339 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 TRAM2Q15035 370 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 NCF4Q15080 339 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 RAB11BQ15907 218 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZBED5Q49AG3 693 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CT45A1Q5HYN5 189 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 TMEM255AQ5JRV8 349 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 TMEM150AQ86TG1 271 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 APRG1Q8IVJ8 170 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR2A1Q8NGT9 310 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 OR5K2Q8NHB8 316 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CT45A3Q8NHU0 189 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 LKAAEAR1Q8TD35 194 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 DTX3LQ8TDB6 740 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 ACER1Q8TDN7 264 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 DNAJC1Q96KC8 554 aaKnown RBP3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 SERPINB12Q96P63 405 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 OPALINQ96PE5 141 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 GABARAPL3Q9BY60 117 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 BLZF1Q9H2G9 400 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 CLSTN2Q9H4D0 955 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 TDRD3Q9H7E2 651 aaKnown RBP3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 SLC25A37Q9NYZ2 338 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 AHSPQ9NZD4 102 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 ZNF225Q9UK10 706 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 PDS5BQ9NTI5 1447 aa3.66□□□□□ -1.82
HMGB1P46-201ENST00000520062 TEX46H3BTG2 121 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 M0R3G1 203 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 TRAF3IP2O43734 574 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 DPM1O60762 260 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CCNB2O95067 398 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 AIFM1O95831 613 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 HLA-HP01893 362 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZDHHC11BP0C7U3 371 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CD1EP15812 388 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 HRH1P35367 487 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 NUDT1P36639 197 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 GPX4P36969 197 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 SLC11A1P49279 550 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CRISP1P54107 249 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 DAOAP59103 153 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 EIF3EP60228 445 aaKnown RBP3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 NDPQ00604 133 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 IRF8Q02556 426 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 PSG7Q13046 419 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 PRPSAP1Q14558 356 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 AGBL2Q5U5Z8 902 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR52W1Q6IF63 320 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 HDDC2Q7Z4H3 204 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CCDC54Q8NEL0 328 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 LRRC58Q96CX6 371 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 TSSK3Q96PN8 268 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 MRPL37Q9BZE1 423 aaKnown RBP3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 UCK2Q9BZX2 261 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 NXF3Q9H4D5 531 aaKnown RBP3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CLMPQ9H6B4 373 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CHRAC1Q9NRG0 131 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 ZNF226Q9NYT6 803 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CHD4Q14839 1912 aa3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 COL22A1Q8NFW1 1626 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CENPJQ9HC77 1338 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P46-201ENST00000520062 CEMIPQ8WUJ3 1361 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 ABCA7Q8IZY2 2146 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 KLLNB2CW77 178 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 AIREO43918 545 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 SRP72O76094 671 aaKnown RBP3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 UTS2O95399 124 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 BGLAPP02818 100 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 KRTAP1-4P0C5Y4 121 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 UBCP0CG48 685 aaKnown RBP3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 PNMA6AP0CW24 399 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 PRKACAP17612 351 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 ELK1P19419 428 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 MSR1P21757 451 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR1G1P47890 313 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 CSNK1DP48730 415 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 SP4Q02446 784 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 WDR43Q15061 677 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 OR7A5Q15622 319 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 GUCA2BQ16661 112 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 KCTD19Q17RG1 926 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 HIKESHIQ53FT3 197 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 CCNJQ5T5M9 372 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 ANKRD22Q5VYY1 191 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 SPAG16Q8N0X2 631 aa3.64□□□□□ -1.83
HMGB1P46-201ENST00000520062 MREGQ8N565 214 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms