RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 CCDC187A0A096LP49 1063 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 OR2C1O95371 312 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 F13BP05160 661 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 ZNF25P17030 456 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-208ENST00000519004 CD200P41217 278 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 ACTBP60709 375 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 RAB1AP62820 205 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 ACTG1P63261 375 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 AWAT2Q6E213 333 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 SLC35F2Q8IXU6 374 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 LYPD6BQ8NI32 183 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 DTD1Q8TEA8 209 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 SLC25A43Q8WUT9 341 aaPredicted RBP12.31□□□□□ -0.44
PABPC1-208ENST00000519004 GAL3ST3Q96A11 431 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 AMDHD1Q96NU7 426 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 PRSS27Q9BQR3 290 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 CST11Q9H112 138 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 SYT4Q9H2B2 425 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 CENPFP49454 3210 aa12.31□□□□□ -0.44
PABPC1-208ENST00000519004 F3P13726 295 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 FABP4P15090 132 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 TOMM20Q15388 145 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 SCGB2B2Q4G0G5 96 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 NXPE4Q6UWF7 544 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 WDR88Q6ZMY6 472 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 Q6ZRG5 221 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 LRRC18Q8N456 261 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 ACOT4Q8N9L9 421 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 OR13C2Q8NGS9 318 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 RNF166Q96A37 237 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-208ENST00000519004 DDA1Q9BW61 102 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 LAMP5Q9UJQ1 280 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 TMED3Q9Y3Q3 217 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 A0A087WUJ7 227 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 PHOX2AO14813 284 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 KLKB1P03952 638 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 BSGP35613 385 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 GNG10P50151 68 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 SCAND1P57086 179 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 MLC1Q15049 377 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 ODF4Q2M2E3 257 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 COL13A1Q5TAT6 717 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-208ENST00000519004 HIST2H3PS2Q5TEC6 136 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 RANBP3LQ86VV4 465 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-208ENST00000519004 ZNF227Q86WZ6 799 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 SLC35F3Q8IY50 421 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 GPR137CQ8N3F9 429 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 OR7G2Q8NG99 324 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 MUCL1Q96DR8 90 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 C16orf58Q96GQ5 468 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 LYSMD1Q96S90 227 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 CNN2Q99439 309 aaKnown RBP12.3□□□□□ -0.44
PABPC1-208ENST00000519004 PHB2Q99623 299 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 KCNK15Q9H427 330 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 CRLF2Q9HC73 371 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 MMP24Q9Y5R2 645 aa12.3□□□□□ -0.44
PABPC1-208ENST00000519004 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 UMAD1C9J7I0 102 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SOX15O60248 233 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 ZIC2O95409 532 aaPredicted RBP12.29□□□□□ -0.44
PABPC1-208ENST00000519004 PTBP3O95758 552 aaKnown RBP12.29□□□□□ -0.44
PABPC1-208ENST00000519004 HMGN2P05204 90 aaKnown RBP12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SLC9A5Q14940 896 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 THEM4Q5T1C6 240 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 PRAMEF8Q5VWM4 474 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 PRAMEF7Q5VXH5 474 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 KCTD9Q7L273 389 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 BHLHE23Q8NDY6 225 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 OR51D1Q8NGF3 324 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 OR2A12Q8NGT7 310 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SEH1LQ96EE3 360 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SLC6A7Q99884 636 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SNHG12Q9BXW3 62 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 RHBGQ9H310 441 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 CLDND1Q9NY35 253 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 CD84Q9UIB8 345 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 MRPS33Q9Y291 106 aaKnown RBP12.29□□□□□ -0.44
PABPC1-208ENST00000519004 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 COL4A3Q01955 1670 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 A0A1W2PPC1 479 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 C5orf51A6NDU8 294 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 CYTIPO60759 359 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 RCBTB2O95199 551 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 THBS1P07996 1170 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 S1PR1P21453 382 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SERPINF1P36955 418 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SOX2P48431 317 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 RPP30P78346 268 aaKnown RBP12.29□□□□□ -0.44
PABPC1-208ENST00000519004 COTL1Q14019 142 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 ZNF674Q2M3X9 581 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 GDPD4Q6W3E5 623 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 TPRG1Q6ZUI0 275 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 OR51L1Q8NGJ5 315 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SLC22A18Q96BI1 424 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 WDR92Q96MX6 357 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 LRFN5Q96NI6 719 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 SLC5A7Q9GZV3 580 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 OR52A5Q9H2C5 316 aa12.29□□□□□ -0.44
PABPC1-208ENST00000519004 CWH43Q9H720 699 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms