RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PAQR4Q8N4S7 273 aaPredicted RBP9.1□□□□□ -0.95
SPIDR-205ENST00000518060 CLDN22Q8N7P3 220 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 SNX33Q8WV41 574 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 ACOT11Q8WXI4 607 aaPredicted RBP9.1□□□□□ -0.95
SPIDR-205ENST00000518060 HDAC2Q92769 488 aaKnown RBP9.1□□□□□ -0.95
SPIDR-205ENST00000518060 ZNF75AQ96N20 296 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 TSPAN32Q96QS1 320 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 RBP7Q96R05 134 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 TXNIPQ9H3M7 391 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 MS4A5Q9H3V2 200 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 NARFLQ9H6Q4 476 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 MYEF2Q9P2K5 600 aaKnown RBP9.1□□□□□ -0.95
SPIDR-205ENST00000518060 EGFL7Q9UHF1 273 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 RPS6KA6Q9UK32 745 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 HIF3AQ9Y2N7 669 aa9.1□□□□□ -0.95
SPIDR-205ENST00000518060 FAM32AQ9Y421 112 aaKnown RBP9.1□□□□□ -0.95
SPIDR-205ENST00000518060 RTTNQ86VV8 2226 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 HTR3EA5X5Y0 456 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 A6NIZ1 184 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 CENPBD1B2RD01 187 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 H7C1C5 153 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 XKRYO14609 159 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 LMX1BO60663 402 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 TGFAP01135 160 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 HNF1AP20823 631 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 CHN2P52757 468 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 KLF3P57682 345 aaPredicted RBP9.09□□□□□ -0.95
SPIDR-205ENST00000518060 RAP1BP61224 184 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 ERVS71-1P61550 626 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 LCN6P62502 163 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 RAP1AP62834 184 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 ERVK-25P63136 954 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 MRPS34P82930 218 aaKnown RBP9.09□□□□□ -0.95
SPIDR-205ENST00000518060 TAF11Q15544 211 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 FXNQ16595 210 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 HIST3H3Q16695 136 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 PABPC1L2AQ5JQF8 200 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 C10orf128Q5T292 105 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 FAM205BPQ63HN1 556 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 TMEM154Q6P9G4 183 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 PODNL1Q6PEZ8 512 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 TBPL2Q6SJ96 375 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 HACD2Q6Y1H2 254 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 MBOAT2Q6ZWT7 520 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 CBLL1Q75N03 491 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 ZNF786Q8N393 782 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 RNF148Q8N7C7 305 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 ARIH2OSQ8N7S6 290 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 AKR7LQ8NHP1 331 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 SYNPRQ8TBG9 265 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 LIPHQ8WWY8 451 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 C11orf40Q8WZ69 217 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 MSI2Q96DH6 328 aaKnown RBP9.09□□□□□ -0.95
SPIDR-205ENST00000518060 FAM46AQ96IP4 442 aaKnown RBP9.09□□□□□ -0.95
SPIDR-205ENST00000518060 SEPHS2Q99611 448 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 MDFIQ99750 246 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 ALG12Q9BV10 488 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 MRPL13Q9BYD1 178 aaKnown RBP9.09□□□□□ -0.95
SPIDR-205ENST00000518060 RERGLQ9H628 205 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 SIAEQ9HAT2 523 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 SMURF2Q9HAU4 748 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 SPAG4Q9NPE6 437 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 MAN2C1Q9NTJ4 1040 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 TAAR3PQ9P1P4 343 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 EIF3KQ9UBQ5 218 aaKnown RBP9.09□□□□□ -0.95
SPIDR-205ENST00000518060 GRHPRQ9UBQ7 328 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 LPAR3Q9UBY5 353 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 GPR160Q9UJ42 338 aa9.09□□□□□ -0.95
SPIDR-205ENST00000518060 ZNF346Q9UL40 294 aaKnown RBP9.09□□□□□ -0.95
SPIDR-205ENST00000518060 ARFGEF3Q5TH69 2177 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 IGKV1D-43A0A0B4J1Z2 117 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 C5orf49A4QMS7 147 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 RNF212BA8MTL3 300 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 FFAR1O14842 300 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 RRP9O43818 475 aaKnown RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 CLPTM1O96005 669 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 HPXP02790 462 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 H1F0P07305 194 aaKnown RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 FAM157CP0CG43 387 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 ZNF32P17041 273 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 IGFBP5P24593 272 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 STOMP27105 288 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 LAP3P28838 519 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 RAD52P43351 418 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 GPR6P46095 362 aaPredicted RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 SLC9A3P48764 834 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 EVX1P49640 407 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 GDI2P50395 445 aaKnown RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 PRKCDQ05655 676 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 KRT72Q14CN4 511 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 TRIP10Q15642 601 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 NRN1LQ496H8 165 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 SPATA46Q5T0L3 261 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 THEM4Q5T1C6 240 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 OR1J1Q8NGS3 322 aa9.08□□□□□ -0.96
SPIDR-205ENST00000518060 NMNAT1Q9HAN9 279 aaPredicted RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 KRCC1Q9NPI7 259 aaPredicted RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 HINT3Q9NQE9 182 aaKnown RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 SAMD4AQ9UPU9 718 aaKnown RBP9.08□□□□□ -0.96
SPIDR-205ENST00000518060 TMEM5Q9Y2B1 443 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms