RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 THBS2P35442 1172 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 CX3CR1P49238 355 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 PPT1P50897 306 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 EMP2P54851 167 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 CLDN6P56747 220 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 GPR85P60893 370 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 SERTAD2Q14140 314 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 MRM1Q6IN84 353 aaKnown RBP6.08□□□□□ -1.44
CPNE3-203ENST00000517490 SLC35D2Q76EJ3 337 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 SGPP2Q8IWX5 399 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF679Q8IYX0 411 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 MRGPRX3Q96LB0 322 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 BMFQ96LC9 184 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 PTDSS2Q9BVG9 487 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 SEPSECSQ9HD40 501 aaKnown RBP6.08□□□□□ -1.44
CPNE3-203ENST00000517490 NPDC1Q9NQX5 325 aaPredicted RBP6.08□□□□□ -1.44
CPNE3-203ENST00000517490 SLC22A11Q9NSA0 550 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 WSB2Q9NYS7 404 aaPredicted RBP6.08□□□□□ -1.44
CPNE3-203ENST00000517490 KCMF1Q9P0J7 381 aa6.08□□□□□ -1.44
CPNE3-203ENST00000517490 NINQ8N4C6 2090 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM269A0A1B0GVZ9 245 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM218A2RU14 115 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 APBB3O95704 486 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 NME2P22392 152 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 CHATP28329 748 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SLC25A1P53007 311 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SLC9A3R2Q15599 337 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 C2orf27AQ580R0 203 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TCEAL5Q5H9L2 206 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 MANEAQ5SRI9 462 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM71Q6P5X7 295 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 RHOUQ7L0Q8 258 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 FRMD1Q8N878 549 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF565Q8N9K5 539 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 AVL9Q8NBF6 648 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 OR4D10Q8NGI6 311 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 OR1J2Q8NGS2 313 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 CCDC74AQ96AQ1 378 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PGLYRP3Q96LB9 341 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ENKD1Q9H0I2 346 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 IL21RQ9HBE5 538 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SERINC1Q9NRX5 453 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF701Q9NV72 531 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 DZANK1Q9NVP4 752 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 RASL12Q9NYN1 266 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PRSS38A1L453 326 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 K7EPK0 472 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 DVL2O14641 736 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF264O43296 627 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 OR2T1O43869 369 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 CTAG2O75638 210 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 OR2A4O95047 310 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 CSTBP04080 98 aaKnown RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TBPP20226 339 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 RAB6AP20340 208 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 BTCP35070 178 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 RNF212Q495C1 297 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TMEFF1Q8IYR6 380 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 FAM71E2Q8N5Q1 922 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 LINC01555Q8NAE3 123 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 OR5M8Q8NGP6 311 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 NT5CQ8TCD5 201 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TSACCQ96A04 125 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 OR2A7Q96R45 310 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 MMP26Q9NRE1 261 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ING1Q9UK53 422 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PCDHGA1Q9Y5H4 931 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 WDR90Q96KV7 1748 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 BRCA1P38398 1863 aaKnown RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PRRC2BQ5JSZ5 2229 aaKnown RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TDRD15B5MCY1 1934 aaKnown RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF726A6NNF4 738 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 A8MXK9 166 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 FGF17O60258 216 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SEMA7AO75326 666 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF254O75437 659 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 IGF2P01344 180 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 DPP4P27487 766 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 GLP1RP43220 463 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZP1P60852 638 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PLCXD2Q0VAA5 305 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 PMPCAQ10713 525 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 FUT5Q11128 374 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 VWA2Q5GFL6 755 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SLC39A5Q6ZMH5 540 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF561Q8N587 486 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 RCBTB1Q8NDN9 531 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 NANPQ8TBE9 248 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ALX4Q9H161 411 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZMAT3Q9HA38 289 aaKnown RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SDHAF3Q9NRP4 125 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 LSM5Q9Y4Y9 91 aaKnown RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF638Q14966 1978 aaKnown RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 MPTX1A8MV57 137 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 TRIM77I1YAP6 450 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 KNG1P01042 644 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 ZGLP1P0C6A0 271 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 OR8U9P0C7N5 309 aa6.07□□□□□ -1.44
CPNE3-203ENST00000517490 POU3F2P20265 443 aaPredicted RBP6.07□□□□□ -1.44
CPNE3-203ENST00000517490 SERPINF1P36955 418 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms