RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ARG1P05089 322 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SFTPBP07988 381 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 ZNF22P17026 224 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 RFC4P35249 363 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 ACTN2P35609 894 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SOAT1P35610 550 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SLC1A2P43004 574 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 GSSP48637 474 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 CCR8P51685 355 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SURF2Q15527 256 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 CHI3L2Q15782 390 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 EXOC3L2Q2M3D2 409 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 KRBOX4Q5JUW0 171 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 C12orf60Q5U649 245 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SPATA1Q5VX52 437 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 METTL21CQ5VZV1 264 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 FAHD2BQ6P2I3 314 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 FBXW12Q6X9E4 464 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 MMS22LQ6ZRQ5 1243 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 Q8NAQ8 132 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SDR42E1Q8WUS8 393 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 BCL2L2Q92843 193 aaPredicted RBP-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SGK3Q96BR1 496 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 PANX3Q96QZ0 392 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 CHCHD6Q9BRQ6 235 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 AATFQ9NY61 560 aaKnown RBP eCLIP-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 HMGXB4Q9UGU5 601 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 SLIT2O94813 1529 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 ASXL3Q9C0F0 2248 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 CNTRLQ7Z7A1 2325 aa-1.58□□□□□ -2.66
RNU6-557P-201ENST00000516842 RTTNQ86VV8 2226 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 A8MWP4 228 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 SYNGR4O95473 234 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 F10P00742 488 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 IGHV3-11P01762 117 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 SERPINF2P08697 491 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 ANXA3P12429 323 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 H2AFXP16104 143 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 PCMT1P22061 227 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 GPR4P46093 362 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 IRX3P78415 501 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 PRPSAP1Q14558 356 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 COG2Q14746 738 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 TRIM16LQ309B1 348 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 FAM205BPQ63HN1 556 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 GOLGA7Q7Z5G4 137 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 CPXCR1Q8N123 301 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 MUC15Q8N387 334 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 LRRC17Q8N6Y2 441 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 SLC26A10Q8NG04 563 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 OR8K1Q8NGG5 319 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 DNASE1L2Q92874 299 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 OR8B2Q96RD0 313 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 NDUFAF3Q9BU61 184 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 YAE1D1Q9NRH1 226 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 C9orf78Q9NZ63 289 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 VAX2Q9UIW0 290 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 BAZ1BQ9UIG0 1483 aaKnown RBP-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 RTEL1-TNFRSF6BF6WH68 1400 aa-1.59□□□□□ -2.66
RNU6-557P-201ENST00000516842 MYCBP2O75592 4640 aa-1.6□□□□□ -2.66
RNU6-557P-201ENST00000516842 SETXQ7Z333 2677 aaKnown RBP-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 CLUHO75153 1309 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 DCHS2Q6V1P9 2916 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 A0A1B0GU33 70 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 A8MUN3 132 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 TIMM44O43615 452 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 PLIN3O60664 434 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 GSTT2P0CG29 244 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 GSTT2BP0CG30 244 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 FGF9P31371 208 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 MAS1LP35410 378 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 NNMTP40261 264 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 CCL11P51671 97 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 PPP5CP53041 499 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 ATXN3P54252 364 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 HERVK_113P63132 956 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 ERVK-8P63133 956 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 ZSCAN26Q16670 478 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 APTXQ7Z2E3 356 aaKnown RBP-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 C16orf62Q7Z3J2 963 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 HDDC2Q7Z4H3 204 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 VN1R4Q7Z5H5 301 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 ZIC4Q8N9L1 334 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 OR2Z1Q8NG97 314 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 SPACA4Q8TDM5 124 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 UPRTQ96BW1 309 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 TBATAQ96M53 351 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 PPM1MQ96MI6 270 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 TRIB3Q96RU7 358 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 ERVK-6Q9BXR3 956 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 NAPBQ9H115 298 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 RANBP3Q9H6Z4 567 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 MCCC2Q9HCC0 563 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 C1orf123Q9NWV4 160 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 SHANK3Q9BYB0 1731 aa-1.6□□□□□ -2.67
RNU6-557P-201ENST00000516842 TTC28Q96AY4 2481 aa-1.61□□□□□ -2.67
RNU6-557P-201ENST00000516842 RAD54L2Q9Y4B4 1467 aa-1.61□□□□□ -2.67
RNU6-557P-201ENST00000516842 IGHV2-70DA0A0C4DH43 119 aa-1.61□□□□□ -2.67
RNU6-557P-201ENST00000516842 HTR3EA5X5Y0 456 aa-1.61□□□□□ -2.67
RNU6-557P-201ENST00000516842 SLC31A1O15431 190 aa-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms