RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 VCX2Q9H322 139 aa0.84□□□□□ -2.27
RNU2-56P-201ENST00000516826 HMG20AQ9NP66 347 aa0.84□□□□□ -2.27
RNU2-56P-201ENST00000516826 NPTNQ9Y639 398 aa0.84□□□□□ -2.27
RNU2-56P-201ENST00000516826 KCNE3Q9Y6H6 103 aa0.84□□□□□ -2.27
RNU2-56P-201ENST00000516826 S4R3C0 116 aa0.84□□□□□ -2.27
RNU2-56P-201ENST00000516826 FCGBPQ9Y6R7 5405 aaPredicted RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 TRAV40A0A0B4J280 105 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 A8MUU9 505 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 HIDE1A8MVS5 230 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 BPY2O14599 106 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 GOSR2O14653 212 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 KMOO15229 486 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 SOCS1O15524 211 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 RBFOX2O43251 390 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 GCM2O75603 506 aaPredicted RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 SURF6O75683 361 aaKnown RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 YIF1AO95070 293 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 VAMP5O95183 116 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 RAB3DO95716 219 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 CD74P04233 296 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 CRYGBP07316 175 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 GNAO1P09471 354 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 POLR2MP0CAP2 368 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 PRPS2P11908 318 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 ZNF14P17017 642 aaPredicted RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 SSR4P51571 173 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 PLP1P60201 277 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 ACTR1AP61163 376 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 RAP1AP62834 184 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 KCNJ2P63252 427 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 ARG2P78540 354 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 ZNF816Q0VGE8 651 aaPredicted RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 BST2Q10589 180 aaKnown RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 IRF4Q15306 451 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 SF3A2Q15428 464 aaKnown RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 PRSS8Q16651 343 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 COX19Q49B96 90 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 KPRPQ5T749 579 aaPredicted RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 ANKRD22Q5VYY1 191 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 FBXW9Q5XUX1 488 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 SHISA6Q6ZSJ9 500 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 NEGR1Q7Z3B1 354 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 RIMKLAQ8IXN7 391 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 MYOCDQ8IZQ8 938 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 MS4A15Q8N5U1 240 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 EIF1ADQ8N9N8 165 aaKnown RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 GATSQ8NAP1 163 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 HSD17B11Q8NBQ5 300 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 OR2L3Q8NG85 312 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 OR1L6Q8NGR2 347 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 OR10J6PQ8NGY7 276 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 OR2G2Q8NGZ5 317 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 MRGPRFQ96AM1 343 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 GALNT14Q96FL9 552 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 MED8Q96G25 268 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 OR10C1Q96KK4 312 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 IFT74Q96LB3 600 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 LINC00477Q96M19 166 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 RNF5Q99942 180 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 LZTS2Q9BRK4 669 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 ULBP2Q9BZM5 246 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 SPNS1Q9H2V7 528 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 CWH43Q9H720 699 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 RPF2Q9H7B2 306 aaKnown RBP0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 SYNDIG1Q9H7V2 258 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 LRRC40Q9H9A6 602 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 IKZF2Q9UKS7 526 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 CLEC4AQ9UMR7 237 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 MAPK8IP3Q9UPT6 1336 aa0.83□□□□□ -2.28
RNU2-56P-201ENST00000516826 TNS2Q63HR2 1409 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 IGLV3-12A0A075B6K2 115 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 IGKV1D-17A0A075B6S4 117 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 A0A1W2PP18 115 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 C7orf66A4D0T2 115 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 RPL36A-HNRNPH2H7BZ11 118 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 FOXE1O00358 373 aaPredicted RBP0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 RAD51BO15315 384 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 RRP8O43159 456 aaKnown RBP0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 PSTPIP1O43586 416 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 CCNKO75909 580 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 CLPXO76031 633 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 SLC25A14O95258 325 aaPredicted RBP0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 AIFM1O95831 613 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 IGKV1-17P01599 117 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 HLA-DPB1P04440 258 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 ADRA2AP08913 450 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 CCNB1P14635 433 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 MX1P20591 662 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 SLC2A5P22732 501 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 GDI1P31150 447 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 RDXP35241 583 aaKnown RBP0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 CDKN1BP46527 198 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 CSNK1A1P48729 337 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 NUTF2P61970 127 aaKnown RBP0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 PRR3P79522 188 aaKnown RBP0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 MRPS22P82650 360 aaKnown RBP0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 MXD1Q05195 221 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 CDC20Q12834 499 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 MAB21L1Q13394 359 aa0.82□□□□□ -2.28
RNU2-56P-201ENST00000516826 PRPSAP1Q14558 356 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms