RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SERPINA1P01009 418 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 MT-ND5P03915 603 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 TACSTD2P09758 323 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 TSPAN19P0C672 248 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 SRD5A1P18405 259 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 DRD4P21917 467 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 CCNOP22674 350 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 CDAP32320 146 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 NUDT2P50583 147 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF133P52736 654 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 SEC24CP53992 1094 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 UCP2P55851 309 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 KLF3P57682 345 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 RAP1BP61224 184 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 RPL27P61353 136 aaKnown RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 RAP1AP62834 184 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 MRPS34P82930 218 aaKnown RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 MAD2L1BPQ15013 274 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 MSMPQ1L6U9 139 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 THEM4Q5T1C6 240 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 TMEM154Q6P9G4 183 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 NRMQ8IXM6 262 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 RNF113BQ8IZP6 322 aaKnown RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 OFCC1Q8IZS5 231 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 OR51A7Q8NH64 312 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF519Q8TB69 540 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 TMEM158Q8WZ71 300 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 HDAC2Q92769 488 aaKnown RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 CMTM5Q96DZ9 223 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 SNX18Q96RF0 628 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 KCTD14Q9BQ13 255 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-215ENST00000515516 SLCO1C1Q9NYB5 712 aa11.74□□□□□ -0.53
TCOF1-215ENST00000515516 LYNX1G3V0Z9 82 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 J3KTA2 159 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 ABCA1O95477 2261 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 SNAP29O95721 258 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 IGFBP1P08833 259 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 LYNX1P0DP58 116 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 NAT2P11245 290 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 MAKP20794 623 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 IGFBP5P24593 272 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 STOMP27105 288 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 RPL4P36578 427 aaKnown RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 GPR6P46095 362 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 SLC9A3P48764 834 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 PCBD1P61457 104 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 PRKCDQ05655 676 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 RIN1Q13671 783 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 ALKBH6Q3KRA9 238 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 FAM120AOSQ5T036 256 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 HACD2Q6Y1H2 254 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 CBLL1Q75N03 491 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 ALDH16A1Q8IZ83 802 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 PAQR4Q8N4S7 273 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 ARIH2OSQ8N7S6 290 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 LINC01356Q8N9X3 169 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 ACOT11Q8WXI4 607 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 HSH2DQ96JZ2 352 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 HINT3Q9NQE9 182 aaKnown RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 MYEF2Q9P2K5 600 aaKnown RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 RPS6KA6Q9UK32 745 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 FAM32AQ9Y421 112 aaKnown RBP11.73□□□□□ -0.53
TCOF1-215ENST00000515516 SNX13Q9Y5W8 968 aa11.73□□□□□ -0.53
TCOF1-215ENST00000515516 TRAV27A0A087WT01 109 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 NME4O00746 187 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 TPD52L2O43399 206 aaKnown RBP11.72□□□□□ -0.53
TCOF1-215ENST00000515516 LILRA1O75019 489 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 IGHMP01871 453 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 HPXP02790 462 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 MMP7P09237 267 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF250P15622 560 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 ACHEP22303 614 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 GCH1P30793 250 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 GSK3BP49841 420 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 GDI2P50395 445 aaKnown RBP11.72□□□□□ -0.53
TCOF1-215ENST00000515516 TMEM33P57088 247 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 MRPS11P82912 194 aaKnown RBP11.72□□□□□ -0.53
TCOF1-215ENST00000515516 FMODQ06828 376 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 PCGF3Q3KNV8 242 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 ELFN2Q5R3F8 820 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 SLC25A47Q6Q0C1 308 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 MBOAT2Q6ZWT7 520 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 IGFN1Q86VF2 1251 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 OR1J1Q8NGS3 322 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 ELAC2Q9BQ52 826 aaKnown RBP11.72□□□□□ -0.53
TCOF1-215ENST00000515516 ZNF416Q9BWM5 594 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 GMPR2Q9P2T1 348 aaKnown RBP11.72□□□□□ -0.53
TCOF1-215ENST00000515516 GRHPRQ9UBQ7 328 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 TMEM5Q9Y2B1 443 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 UGT2A1Q9Y4X1 527 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 TIMM10BQ9Y5J6 103 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 ANK3Q12955 4377 aaKnown RBP11.72□□□□□ -0.53
TCOF1-215ENST00000515516 CR1P17927 2039 aa11.72□□□□□ -0.53
TCOF1-215ENST00000515516 A0A1W2PPL8 197 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 C5orf49A4QMS7 147 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 C17orf100A8MU93 164 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 XKRYO14609 159 aa11.71□□□□□ -0.53
TCOF1-215ENST00000515516 PHF1O43189 567 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-215ENST00000515516 PPIHO43447 177 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms