RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ZNF350Q9GZX5 532 aa6.69□□□□□ -1.34
CLIP1-205ENST00000514271 OR51I1Q9H343 314 aa6.69□□□□□ -1.34
CLIP1-205ENST00000514271 FN3KRPQ9HA64 309 aa6.69□□□□□ -1.34
CLIP1-205ENST00000514271 HCN3Q9P1Z3 774 aa6.69□□□□□ -1.34
CLIP1-205ENST00000514271 OR5V1Q9UGF6 321 aa6.69□□□□□ -1.34
CLIP1-205ENST00000514271 LHX6Q9UPM6 363 aa6.69□□□□□ -1.34
CLIP1-205ENST00000514271 F8W036 122 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 NPIPB9F8W1W9 429 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 H7C417 338 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 NME6O75414 186 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 CLEC3AO75596 197 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 GLSO94925 669 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 CBX7O95931 251 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 MT-ND4P03905 459 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 CD5P06127 495 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 LCN1P31025 176 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 GPR4P46093 362 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 STXBP1P61764 594 aaKnown RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 RPS26P62854 115 aaKnown RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 MRPS10P82664 201 aaKnown RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 IRF8Q02556 426 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF791Q3KP31 576 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 ARHGAP11BQ3KRB8 267 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 AMZ1Q400G9 498 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 DNLZQ5SXM8 178 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 LHFPL3Q86UP9 236 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 SLC30A7Q8NEW0 376 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 GLYATL2Q8WU03 294 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 RFKQ969G6 155 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 SLC46A1Q96NT5 459 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 NUDT22Q9BRQ3 303 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 TMED9Q9BVK6 235 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 CACNG6Q9BXT2 260 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 ATG10Q9H0Y0 220 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 C14orf105Q9NVL8 296 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 SOHLH2Q9NX45 425 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 TEX10Q9NXF1 929 aaPredicted RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 P2RX2Q9UBL9 471 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 MTFP1Q9UDX5 166 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 FBXL2Q9UKC9 423 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 SLC22A7Q9Y694 548 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 A0A087WV48 116 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 C9orf170A2RU37 121 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 OR14I1A6ND48 311 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 OR2W5A6NFC9 320 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 IFITM5A6NNB3 132 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 EFCAB7A8K855 629 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 H0YIG0 161 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 M0R233 179 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 EDN3P14138 238 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 IL11P20809 199 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 WNT5AP41221 380 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 GCGRP47871 477 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 GABRA4P48169 554 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF81P51508 661 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 GPR143P51810 404 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 CASP9P55211 416 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 CDH11P55287 796 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 TAS2R43P59537 309 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 NANOS3P60323 173 aaKnown RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 PPIAP62937 165 aaKnown RBP6.68□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF750Q32MQ0 723 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 NKAIN2Q5VXU1 208 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 GLB1L2Q8IW92 636 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 LINC01555Q8NAE3 123 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 PPP1R35Q8TAP8 253 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 MIB2Q96AX9 1013 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 TM4SF19Q96DZ7 209 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 C1GALT1C1Q96EU7 318 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 WDR54Q9H977 334 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 C20orf141Q9NUB4 165 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 PILRAQ9UKJ1 303 aa6.68□□□□□ -1.34
CLIP1-205ENST00000514271 LOC105369274A0A096LPK9 316 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 IDSB3KWA1 339 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SULT2B1O00204 365 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 LGALS8O00214 317 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SCAF4O95104 1147 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SLC35G6P0C7Q6 338 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 VEGFCP49767 419 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 GDI2P50395 445 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 PNLIPRP2P54317 469 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 PITPNAQ00169 270 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ZMYND11Q15326 602 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ELP2Q6IA86 826 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 RHBDD2Q6NTF9 364 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 LRRC69Q6ZNQ3 347 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 FAM122BQ7Z309 247 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 OR4N4Q8N0Y3 316 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 PUSL1Q8N0Z8 303 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 FTMTQ8N4E7 242 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 TMEM255BQ8WV15 326 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 PHF3Q92576 2039 aaKnown RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 RIT1Q92963 219 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 MOAP1Q96BY2 351 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ZNF501Q96CX3 271 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-205ENST00000514271 MRI1Q9BV20 369 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 TRIM2Q9C040 744 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SLC26A1Q9H2B4 701 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 ARV1Q9H2C2 271 aa6.67□□□□□ -1.34
CLIP1-205ENST00000514271 SLC6A20Q9NP91 592 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms