RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 EPHA2P29317 976 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 HOXC12P31275 282 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 UGT2B10P36537 528 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 CDKN2AP42771 156 aaKnown RBP6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 FOXG1P55316 489 aaPredicted RBP6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 CDC42P60953 191 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 FAM27E3Q08E93 113 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 CRMP1Q14194 572 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 NRN1LQ496H8 165 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF362Q5T0B9 420 aaPredicted RBP6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 C1QTNF12Q5T7M4 302 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 C9orf135Q5VTT2 229 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 TMEM236Q5W0B7 351 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 C12orf73Q69YU5 71 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 LRFN4Q6PJG9 635 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC25A47Q6Q0C1 308 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF627Q7L945 461 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 BHLHA15Q7RTS1 189 aaPredicted RBP6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 SSX8Q7RTT4 187 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 P2RY8Q86VZ1 359 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 GALNT4Q8N4A0 578 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC37A3Q8NCC5 494 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 NPEPL1Q8NDH3 523 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 OR1K1Q8NGR3 316 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 HRASLS5Q96KN8 279 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 PITX2Q99697 317 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 NUAK2Q9H093 628 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 NELFAQ9H3P2 528 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 TOR3AQ9H497 397 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 RPRD1BQ9NQG5 326 aaKnown RBP6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 TMEM38BQ9NVV0 291 aa6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 RAI1Q7Z5J4 1906 aaPredicted RBP6.66□□□□□ -1.34
HMGXB3-204ENST00000513318 COL12A1Q99715 3063 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 IGKV1D-43A0A0B4J1Z2 117 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 A0A1W2PPL8 197 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 OR6C68A6NDL8 312 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 OR5H1A6NKK0 313 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 PRR23D1E9PI22 279 aaPredicted RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 E9PQ18 207 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 H0YJX3 145 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 DCTN6O00399 190 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 DLGAP1O14490 977 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 PRODHO43272 600 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC16A7O60669 478 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 KHDRBS3O75525 346 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 SEC14L2O76054 403 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 FARS2O95363 451 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 PRR23D2P0DMB1 279 aaPredicted RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 B4GALT1P15291 398 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 IGFBP2P18065 325 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 NPR2P20594 1047 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 PAX7P23759 505 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 GGT2P36268 569 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 POLR2IP36954 125 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 GUCA1AP43080 201 aaPredicted RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 MAP2K3P46734 347 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 PTDSS1P48651 473 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 SLC25A1P53007 311 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 MRPS34P82930 218 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 ARF1P84077 181 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 GLO1Q04760 184 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 KEAP1Q14145 624 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 TSC22D1Q15714 1073 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 GABRA6Q16445 453 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 SNAPC1Q16533 368 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 ZIK1Q3SY52 487 aaPredicted RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 TBRG1Q3YBR2 411 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 TIMM23BQ5SRD1 257 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 ANKRD16Q6P6B7 361 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 KLHL24Q6TFL4 600 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 LYPD4Q6UWN0 246 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF813Q6ZN06 617 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 FOXL2NBQ6ZUU3 175 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 ZBTB46Q86UZ6 589 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 CYB561A3Q8NBI2 242 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 ZNF555Q8NEP9 628 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 OR2T4Q8NH00 348 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 FAM81AQ8TBF8 368 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 NRG4Q8WWG1 115 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 NSMAFQ92636 917 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 S100PBPQ96BU1 408 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 MUS81Q96NY9 551 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 TSSK2Q96PF2 358 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 MBOAT4Q96T53 435 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 DDOQ99489 341 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 NMNAT2Q9BZQ4 307 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 ACTR6Q9GZN1 396 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 OBP2BQ9NPH6 170 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 HINT3Q9NQE9 182 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 IMPAD1Q9NX62 359 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 TVP23BQ9NYZ1 205 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 NDRG3Q9UGV2 375 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 NDRG4Q9ULP0 352 aaKnown RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 AMDHD2Q9Y303 409 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 GMPPBQ9Y5P6 360 aa6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 USP9YO00507 2555 aaPredicted RBP6.65□□□□□ -1.34
HMGXB3-204ENST00000513318 CACNA1DQ01668 2161 aa6.65□□□□□ -1.35
HMGXB3-204ENST00000513318 ARPC4-TTLL3A0A0A6YYG9 625 aa6.64□□□□□ -1.35
HMGXB3-204ENST00000513318 IGLV1-36A0A0B4J1U3 117 aa6.64□□□□□ -1.35
HMGXB3-204ENST00000513318 LOC100130705A0A1B0GUX0 176 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms