RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 FAM151AQ8WW52 585 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 TOP1MTQ969P6 601 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 C9orf72Q96LT7 481 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 P2RX4Q99571 388 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 ECSITQ9BQ95 431 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 MMP26Q9NRE1 261 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 CHRAC1Q9NRG0 131 aa3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 SAMSN1Q9NSI8 373 aaKnown RBP3.8□□□□□ -1.8
HMGB1P47-201ENST00000511281 H7C0C1 242 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 SPOPO43791 374 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 FCN3O75636 299 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 LY6G6DO95868 133 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 ACSM4P0C7M7 580 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF250P15622 560 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 CRISP2P16562 243 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 RPS21P63220 83 aaKnown RBP3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 SP4Q02446 784 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 DNAJC3Q13217 504 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF726P1Q15940 193 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 TMEM255AQ5JRV8 349 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 COA6Q5JTJ3 125 aaKnown RBP3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 C6orf89Q6UWU4 347 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 ACP7Q6ZNF0 438 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 TMEM179Q6ZVK1 233 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 FAM122BQ7Z309 247 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 VTCN1Q7Z7D3 282 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 THOC6Q86W42 341 aaKnown RBP3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 PROKR2Q8NFJ6 384 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 LKAAEAR1Q8TD35 194 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 DCUN1D4Q92564 292 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 NAT6Q93015 286 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 AURKBQ96GD4 344 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 NXF3Q9H4D5 531 aaKnown RBP3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 CTPS2Q9NRF8 586 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 MYEF2Q9P2K5 600 aaKnown RBP3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 KCNE3Q9Y6H6 103 aa3.79□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZNF99A8MXY4 864 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 H3BNH8 94 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 ZBTB5O15062 677 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 EMC8O43402 210 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 SRP72O76094 671 aaKnown RBP3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 UTS2O95399 124 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 TACSTD2P09758 323 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 MGMTP16455 207 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 CD82P27701 267 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 HRH1P35367 487 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 CTRLP40313 264 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 STX17P56962 302 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 CARD18P57730 90 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 STXBP1P61764 594 aaKnown RBP3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 GNB2P62879 340 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 TWF1Q12792 350 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 DAZ2Q13117 558 aaKnown RBP3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 TMED1Q13445 227 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 HERPUD1Q15011 391 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR7A5Q15622 319 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 UBE2UQ5VVX9 321 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 FRMPD2BQ6IN97 320 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 LCN12Q6JVE5 192 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 TMEM150AQ86TG1 271 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 LRRC75AQ8NAA5 344 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 SUMF2Q8NBJ7 301 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 OR5B3Q8NH48 314 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 IMMP1LQ96LU5 166 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 SERPINB12Q96P63 405 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 RASL11BQ9BPW5 248 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 LZTS2Q9BRK4 669 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 MRPL37Q9BZE1 423 aaKnown RBP3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 RPF2Q9H7B2 306 aaKnown RBP3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 PXMP2Q9NR77 195 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 DAZ3Q9NR90 486 aaKnown RBP3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 PRR34Q9NV39 138 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 CLN6Q9NWW5 311 aa3.78□□□□□ -1.8
HMGB1P47-201ENST00000511281 CEMIPQ8WUJ3 1361 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 WDR62O43379 1518 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 F6UB75 175 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 DPM1O60762 260 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 ICOSLGO75144 302 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 AIFM1O95831 613 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 IGLV1-47P01700 117 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 FUT3P21217 361 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 ZBTB25P24278 435 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 OR1E1P30953 314 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 LONP1P36776 959 aaKnown RBP3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 MXD1Q05195 221 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 WDR43Q15061 677 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 SPECC1LQ69YQ0 1117 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 NUBPLQ8TB37 319 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 MCOLN3Q8TDD5 553 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 SEH1LQ96EE3 360 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 DNAJC1Q96KC8 554 aaKnown RBP3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 CSPG4P5Q96PW8 444 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 YTHDF1Q9BYJ9 559 aaKnown RBP3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 SLC7A5P2Q9GIP4 190 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 MYOZ2Q9NPC6 264 aa3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 F11RQ9Y624 299 aaKnown RBP3.77□□□□□ -1.81
HMGB1P47-201ENST00000511281 IGLV3-10A0A075B6K4 115 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 A0A1B0GUH1 482 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 A6NDN8 102 aa3.76□□□□□ -1.81
HMGB1P47-201ENST00000511281 GJE1A6NN92 205 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms