RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 LINC00471Q8N535 108 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 PAPD5Q8NDF8 572 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 GNPDA2Q8TDQ7 276 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 NANOS1Q8WY41 292 aaKnown RBP10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 PERPQ96FX8 193 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 OR52D1Q9H346 318 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 ZNF442Q9H7R0 627 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 KRCC1Q9NPI7 259 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 CA10Q9NS85 328 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 VSX1Q9NZR4 365 aaPredicted RBP10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 IL20RAQ9UHF4 553 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 SLC7A8Q9UHI5 535 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 FBXL3Q9UKT7 428 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 TMCC3Q9ULS5 477 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 IER3IP1Q9Y5U9 82 aa10.17□□□□□ -0.78
HMGXB3-203ENST00000510472 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 VPS13CQ709C8 3753 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 TEX13CA0A0J9YWL9 993 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 TCRBV3S1A0A5B6 114 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 HOXB6P17509 224 aaKnown RBP10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 NR4A1P22736 598 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 CDKN1AP38936 164 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 CDKN2AP42771 156 aaKnown RBP10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 PTDSS1P48651 473 aaKnown RBP10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 CD47Q08722 323 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 PPP1R8Q12972 351 aaKnown RBP10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 GK3PQ14409 553 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 RAB39AQ14964 217 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 ADIPOQQ15848 244 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 ETFDHQ16134 617 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 Q5PR19 223 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 ZNF362Q5T0B9 420 aaPredicted RBP10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 ZNF620Q6ZNG0 422 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 DNM1P46Q6ZS02 220 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 PTCHD4Q6ZW05 846 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 SLC16A14Q7RTX9 510 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 FBXL14Q8N1E6 418 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 OR9Q2Q8NGE9 314 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 NSMAFQ92636 917 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 RASD2Q96D21 266 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 FBXO17Q96EF6 278 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 LRGUKQ96M69 825 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 ZNF570Q96NI8 536 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 DDOQ99489 341 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 NDEL1Q9GZM8 345 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 IL20Q9NYY1 176 aa10.16□□□□□ -0.78
HMGXB3-203ENST00000510472 ACANP16112 2415 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 TMEM129A0AVI4 362 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 DHRS12A0PJE2 317 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 H7C1C5 153 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 H7C417 338 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 IDH3BO43837 385 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 NDUFS7O75251 213 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 ATP5HO75947 161 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 IGHV4-39P01824 125 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 TP53P04637 393 aaPredicted RBP10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 CST2P09228 141 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 CD99P14209 185 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 FOSL1P15407 271 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 CTLA4P16410 223 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 THBS4P35443 961 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 SERPINF1P36955 418 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 RPS6KA3P51812 740 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 ATP5J2P56134 94 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 LCN6P62502 163 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 KRR1Q13601 381 aaKnown RBP10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 ENDOGQ14249 297 aaKnown RBP10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 FLOT2Q14254 428 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 EFNB3Q15768 340 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 MSMPQ1L6U9 139 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 MICAQ29983 383 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 SLC36A2Q495M3 483 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 CD300LDQ6UXZ3 194 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 RASSF6Q6ZTQ3 369 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 YTHDF3Q7Z739 585 aaKnown RBP10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 ADCK1Q86TW2 530 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 CPEB3Q8NE35 698 aaKnown RBP10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 GTPBP3Q969Y2 492 aaKnown RBP10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 SLCO4A1Q96BD0 722 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 TRMT61AQ96FX7 289 aaKnown RBP10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 SAMD8Q96LT4 415 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 SNX18Q96RF0 628 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 KCNS3Q9BQ31 491 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 DGCR6LQ9BY27 220 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 POLE4Q9NR33 117 aa10.15□□□□□ -0.78
HMGXB3-203ENST00000510472 DCTN6O00399 190 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 BHLHE40O14503 412 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 XKRYO14609 159 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 CCNB2O95067 398 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 STAMBPO95630 424 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 PPP1R3DO95685 299 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 RAB36O95755 333 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 IGFBP1P08833 259 aaPredicted RBP10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 OR4A8P0C604 315 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 ZNF32P17041 273 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 LAP3P28838 519 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 SLC6A6P31641 620 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 RASSF2P50749 326 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 PSG4Q00888 419 aa10.14□□□□□ -0.79
HMGXB3-203ENST00000510472 KCNMB1Q16558 191 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms