RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 RBM15BQ8NDT2 890 aaKnown RBP8.83□□□□□ -1
SNF8-207ENST00000509995 VPS37AQ8NEZ2 397 aa8.83□□□□□ -1
SNF8-207ENST00000509995 MIPOL1Q8TD10 442 aa8.83□□□□□ -1
SNF8-207ENST00000509995 WIPF2Q8TF74 440 aaPredicted RBP8.83□□□□□ -1
SNF8-207ENST00000509995 XAGE5Q8WWM1 108 aa8.83□□□□□ -1
SNF8-207ENST00000509995 L3HYPDHQ96EM0 354 aa8.83□□□□□ -1
SNF8-207ENST00000509995 TECTBQ96PL2 329 aa8.83□□□□□ -1
SNF8-207ENST00000509995 RCHY1Q96PM5 261 aa8.83□□□□□ -1
SNF8-207ENST00000509995 GSTO2Q9H4Y5 243 aa8.83□□□□□ -1
SNF8-207ENST00000509995 TMEM38BQ9NVV0 291 aa8.83□□□□□ -1
SNF8-207ENST00000509995 MAB21L2Q9Y586 359 aa8.83□□□□□ -1
SNF8-207ENST00000509995 RNF103-CHMP3A0A140T963 221 aa8.82□□□□□ -1
SNF8-207ENST00000509995 SURF4O15260 269 aa8.82□□□□□ -1
SNF8-207ENST00000509995 CFLARO15519 480 aa8.82□□□□□ -1
SNF8-207ENST00000509995 HPRP00739 348 aa8.82□□□□□ -1
SNF8-207ENST00000509995 GKN3PP0CG01 181 aa8.82□□□□□ -1
SNF8-207ENST00000509995 ARRB2P32121 409 aa8.82□□□□□ -1
SNF8-207ENST00000509995 RPL3P39023 403 aaKnown RBP8.82□□□□□ -1
SNF8-207ENST00000509995 CSNK1A1P48729 337 aa8.82□□□□□ -1
SNF8-207ENST00000509995 NPY4RP50391 375 aa8.82□□□□□ -1
SNF8-207ENST00000509995 COPZ1P61923 177 aa8.82□□□□□ -1
SNF8-207ENST00000509995 PPP1CBP62140 327 aa8.82□□□□□ -1
SNF8-207ENST00000509995 RFTN2Q52LD8 501 aaPredicted RBP8.82□□□□□ -1
SNF8-207ENST00000509995 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
SNF8-207ENST00000509995 Q6ZR03 302 aa8.82□□□□□ -1
SNF8-207ENST00000509995 DCDC5Q6ZRR9 648 aa8.82□□□□□ -1
SNF8-207ENST00000509995 H1FNTQ75WM6 255 aaPredicted RBP8.82□□□□□ -1
SNF8-207ENST00000509995 SLC16A14Q7RTX9 510 aa8.82□□□□□ -1
SNF8-207ENST00000509995 ZER1Q7Z7L7 766 aa8.82□□□□□ -1
SNF8-207ENST00000509995 ZNF440Q8IYI8 595 aa8.82□□□□□ -1
SNF8-207ENST00000509995 CLEC4FQ8N1N0 589 aa8.82□□□□□ -1
SNF8-207ENST00000509995 SCAIQ8N9R8 606 aa8.82□□□□□ -1
SNF8-207ENST00000509995 PNLDC1Q8NA58 520 aaKnown RBP8.82□□□□□ -1
SNF8-207ENST00000509995 ADPRHL1Q8NDY3 354 aa8.82□□□□□ -1
SNF8-207ENST00000509995 ZNF420Q8TAQ5 688 aaPredicted RBP8.82□□□□□ -1
SNF8-207ENST00000509995 NPRL2Q8WTW4 380 aa8.82□□□□□ -1
SNF8-207ENST00000509995 NSMAFQ92636 917 aa8.82□□□□□ -1
SNF8-207ENST00000509995 MAGEB18Q96M61 343 aa8.82□□□□□ -1
SNF8-207ENST00000509995 INPP5EQ9NRR6 644 aa8.82□□□□□ -1
SNF8-207ENST00000509995 SERTAD4Q9NUC0 356 aa8.82□□□□□ -1
SNF8-207ENST00000509995 ATAD3AQ9NVI7 634 aa8.82□□□□□ -1
SNF8-207ENST00000509995 EIF3KQ9UBQ5 218 aaKnown RBP8.82□□□□□ -1
SNF8-207ENST00000509995 PRDM4Q9UKN5 801 aa8.82□□□□□ -1
SNF8-207ENST00000509995 LSM4Q9Y4Z0 139 aaKnown RBP8.82□□□□□ -1
SNF8-207ENST00000509995 ZNF726A6NNF4 738 aa8.81□□□□□ -1
SNF8-207ENST00000509995 H3BUX3 64 aa8.81□□□□□ -1
SNF8-207ENST00000509995 NPHS1O60500 1241 aa8.81□□□□□ -1
SNF8-207ENST00000509995 CRCPO75575 148 aa8.81□□□□□ -1
SNF8-207ENST00000509995 JTBO76095 146 aa8.81□□□□□ -1
SNF8-207ENST00000509995 PAHP00439 452 aa8.81□□□□□ -1
SNF8-207ENST00000509995 FAHP16930 419 aa8.81□□□□□ -1
SNF8-207ENST00000509995 NCF2P19878 526 aaPredicted RBP8.81□□□□□ -1
SNF8-207ENST00000509995 RPS4Y1P22090 263 aaKnown RBP8.81□□□□□ -1
SNF8-207ENST00000509995 STOMP27105 288 aa8.81□□□□□ -1
SNF8-207ENST00000509995 GRPRP30550 384 aa8.81□□□□□ -1
SNF8-207ENST00000509995 PSMB10P40306 273 aa8.81□□□□□ -1
SNF8-207ENST00000509995 ACAA2P42765 397 aaKnown RBP8.81□□□□□ -1
SNF8-207ENST00000509995 ANXA11P50995 505 aaKnown RBP8.81□□□□□ -1
SNF8-207ENST00000509995 PRKAA2P54646 552 aa8.81□□□□□ -1
SNF8-207ENST00000509995 ARF6P62330 175 aa8.81□□□□□ -1
SNF8-207ENST00000509995 HSF2Q03933 536 aa8.81□□□□□ -1
SNF8-207ENST00000509995 C2orf54Q08AI8 447 aa8.81□□□□□ -1
SNF8-207ENST00000509995 GPAT3Q53EU6 434 aa8.81□□□□□ -1
SNF8-207ENST00000509995 RUNDC3AQ59EK9 446 aa8.81□□□□□ -1
SNF8-207ENST00000509995 FAM69AQ5T7M9 428 aa8.81□□□□□ -1
SNF8-207ENST00000509995 TNFAIP8L2Q6P589 184 aaPredicted RBP8.81□□□□□ -1
SNF8-207ENST00000509995 NATD1Q8N6N6 113 aa8.81□□□□□ -1
SNF8-207ENST00000509995 DTX3Q8N9I9 347 aa8.81□□□□□ -1
SNF8-207ENST00000509995 HIPK4Q8NE63 616 aa8.81□□□□□ -1
SNF8-207ENST00000509995 OR4K5Q8NGD3 323 aa8.81□□□□□ -1
SNF8-207ENST00000509995 OR2T11Q8NH01 316 aa8.81□□□□□ -1
SNF8-207ENST00000509995 ABHD4Q8TB40 342 aa8.81□□□□□ -1
SNF8-207ENST00000509995 TXNDC15Q96J42 360 aa8.81□□□□□ -1
SNF8-207ENST00000509995 NPFFR1Q9GZQ6 430 aa8.81□□□□□ -1
SNF8-207ENST00000509995 RAB18Q9NP72 206 aa8.81□□□□□ -1
SNF8-207ENST00000509995 RLIMQ9NVW2 624 aa8.81□□□□□ -1
SNF8-207ENST00000509995 TMED5Q9Y3A6 229 aa8.81□□□□□ -1
SNF8-207ENST00000509995 C5orf49A4QMS7 147 aa8.8□□□□□ -1
SNF8-207ENST00000509995 MS4A18H0YCH9 400 aa8.8□□□□□ -1
SNF8-207ENST00000509995 SLC28A1O00337 649 aa8.8□□□□□ -1
SNF8-207ENST00000509995 LHBP01229 141 aa8.8□□□□□ -1
SNF8-207ENST00000509995 INHBAP08476 426 aa8.8□□□□□ -1
SNF8-207ENST00000509995 MMP7P09237 267 aaPredicted RBP8.8□□□□□ -1
SNF8-207ENST00000509995 NQO1P15559 274 aaKnown RBP8.8□□□□□ -1
SNF8-207ENST00000509995 IL7RP16871 459 aa8.8□□□□□ -1
SNF8-207ENST00000509995 AHCYP23526 432 aa8.8□□□□□ -1
SNF8-207ENST00000509995 ATP5F1P24539 256 aaPredicted RBP8.8□□□□□ -1
SNF8-207ENST00000509995 ANP32AP39687 249 aaKnown RBP8.8□□□□□ -1
SNF8-207ENST00000509995 MAGEA4P43358 317 aa8.8□□□□□ -1
SNF8-207ENST00000509995 PSG7Q13046 419 aa8.8□□□□□ -1
SNF8-207ENST00000509995 CALCOCO2Q13137 446 aa8.8□□□□□ -1
SNF8-207ENST00000509995 GNA13Q14344 377 aa8.8□□□□□ -1
SNF8-207ENST00000509995 HABP2Q14520 560 aaPredicted RBP8.8□□□□□ -1
SNF8-207ENST00000509995 LY6EQ16553 131 aa8.8□□□□□ -1
SNF8-207ENST00000509995 MS4A18Q3C1V0 323 aa8.8□□□□□ -1
SNF8-207ENST00000509995 PABPC1L2AQ5JQF8 200 aa8.8□□□□□ -1
SNF8-207ENST00000509995 FAM201AQ5SY85 155 aa8.8□□□□□ -1
SNF8-207ENST00000509995 CRIP3Q6Q6R5 217 aa8.8□□□□□ -1
SNF8-207ENST00000509995 METAP1DQ6UB28 335 aaPredicted RBP8.8□□□□□ -1
SNF8-207ENST00000509995 NHLRC1Q6VVB1 395 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms