RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZNF32P17041 273 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 LAP3P28838 519 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 HMGA2P52926 109 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 ERVS71-1P61550 626 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 KRR1Q13601 381 aaKnown RBP11.72□□□□□ -0.53
SNF8-206ENST00000509989 ENDOGQ14249 297 aaKnown RBP11.72□□□□□ -0.53
SNF8-206ENST00000509989 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 C1orf94Q6P1W5 598 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 FOXL2NBQ6ZUU3 175 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 LRP11Q86VZ4 500 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 HS3ST5Q8IZT8 346 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 FBXL14Q8N1E6 418 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 ZCCHC24Q8N2G6 241 aaKnown RBP11.72□□□□□ -0.53
SNF8-206ENST00000509989 MAPK1IP1LQ8NDC0 245 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 AKR7LQ8NHP1 331 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 ZNF570Q96NI8 536 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 GPX7Q96SL4 187 aaPredicted RBP11.72□□□□□ -0.53
SNF8-206ENST00000509989 ALG12Q9BV10 488 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 SYT4Q9H2B2 425 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 OR51B6Q9H340 312 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 CBLN4Q9NTU7 201 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 GRHPRQ9UBQ7 328 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 SLC7A8Q9UHI5 535 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 FZR1Q9UM11 496 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 POMPQ9Y244 141 aa11.72□□□□□ -0.53
SNF8-206ENST00000509989 ANK3Q12955 4377 aaKnown RBP11.72□□□□□ -0.53
SNF8-206ENST00000509989 PRSS37A4D1T9 235 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 CENPBD1B2RD01 187 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 H7C1Q1 480 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 DNAJC8O75937 253 aaPredicted RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 OR4A8P0C604 315 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 FPR3P25089 353 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 APEX1P27695 318 aaKnown RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 APOBEC3AP31941 199 aaPredicted RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 ZNF84P51523 738 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 MRPS34P82930 218 aaKnown RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 CHRNB3Q05901 458 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 TRAP1Q12931 704 aaKnown RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 SNTB2Q13425 540 aaKnown RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 TAF11Q15544 211 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 RFX4Q33E94 735 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 C3orf36Q3SXR2 165 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 TMEM255AQ5JRV8 349 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 AGAP6Q5VW22 663 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 OR2T5Q6IEZ7 315 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 SMARCD3Q6STE5 483 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 Q71RC1 249 aaPredicted RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 SLC16A14Q7RTX9 510 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 DEPDC4Q8N2C3 294 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 OR2T29Q8NH02 315 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 FANK1Q8TC84 345 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 ZNRF4Q8WWF5 429 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 ERMAPQ96PL5 475 aaPredicted RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 CHID1Q9BWS9 393 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 MUC13Q9H3R2 512 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 CXorf56Q9H5V9 222 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 RERGLQ9H628 205 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 DENND2DQ9H6A0 471 aaPredicted RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 MAGIXQ9H6Y5 334 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 RNF121Q9H920 327 aa11.71□□□□□ -0.53
SNF8-206ENST00000509989 MYEF2Q9P2K5 600 aaKnown RBP11.71□□□□□ -0.53
SNF8-206ENST00000509989 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
SNF8-206ENST00000509989 UBL3O95164 117 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 RAB36O95755 333 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SERPINA5P05154 406 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 FAM157BP0CG42 384 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 NR4A1P22736 598 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SDHAP31040 664 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SMIM11AP58511 58 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 PSG4Q00888 419 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 TSPAN31Q12999 210 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 TNK1Q13470 666 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 MEP1BQ16820 701 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 ANKDD1AQ495B1 522 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 DNAL1Q4LDG9 190 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 PABPC1L2AQ5JQF8 200 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 CLEC12AQ5QGZ9 265 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 THEM4Q5T1C6 240 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SLC35F1Q5T1Q4 408 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SHEQ5VZ18 495 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 ZNF544Q6NX49 715 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 ZNF620Q6ZNG0 422 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 CCDC36Q8IYA8 594 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SVOPLQ8N434 492 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 OR4K13Q8NH42 304 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 GNPDA2Q8TDQ7 276 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 LRGUKQ96M69 825 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 RBP7Q96R05 134 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 NIPSNAP1Q9BPW8 284 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 ZNF416Q9BWM5 594 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 NUAK2Q9H093 628 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 WNT5BQ9H1J7 359 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SIAEQ9HAT2 523 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 SMURF2Q9HAU4 748 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 TMCC3Q9ULS5 477 aa11.7□□□□□ -0.54
SNF8-206ENST00000509989 COA3Q9Y2R0 106 aaPredicted RBP11.7□□□□□ -0.54
SNF8-206ENST00000509989 TLN2Q9Y4G6 2542 aa11.69□□□□□ -0.54
SNF8-206ENST00000509989 CSPG4Q6UVK1 2322 aa11.69□□□□□ -0.54
SNF8-206ENST00000509989 LOC100509620A0A075B734 347 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms