RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 LRRC23Q53EV4 343 aaPredicted RBP13.17□□□□□ -0.3
TPM3-219ENST00000509409 ZNF583Q96ND8 569 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 TSPAN32Q96QS1 320 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 SIAEQ9HAT2 523 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 C20orf141Q9NUB4 165 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 DECR2Q9NUI1 292 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 MRGBPQ9NV56 204 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 HIF1ANQ9NWT6 349 aa13.17□□□□□ -0.3
TPM3-219ENST00000509409 EIF3KQ9UBQ5 218 aaKnown RBP13.17□□□□□ -0.3
TPM3-219ENST00000509409 BBIP1A8MTZ0 92 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 WNT9BO14905 357 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 NCR1O76036 304 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 SLC2A10O95528 541 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 TFP02787 698 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 MT-ND5P03915 603 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 GUCA1AP43080 201 aaPredicted RBP13.16□□□□□ -0.3
TPM3-219ENST00000509409 TEKQ02763 1124 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
TPM3-219ENST00000509409 PCGF3Q3KNV8 242 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 CYBRD1Q53TN4 286 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 PABPC1L2AQ5JQF8 200 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 PCYOX1LQ8NBM8 494 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 OR1J1Q8NGS3 322 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 RBP7Q96R05 134 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 GRIP1Q9Y3R0 1128 aa13.16□□□□□ -0.3
TPM3-219ENST00000509409 FAM157AC9JC47 383 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 SNAP29O95721 258 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 IGF2P01344 180 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 MMP7P09237 267 aaPredicted RBP13.15□□□□□ -0.3
TPM3-219ENST00000509409 GAAP10253 952 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 THRBP10828 461 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 STOMP27105 288 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 GCH1P30793 250 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 KDELR2P33947 212 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
TPM3-219ENST00000509409 MVKQ03426 396 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 GLO1Q04760 184 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 ST3GAL3Q11203 375 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 TSTQ16762 297 aaKnown RBP13.15□□□□□ -0.3
TPM3-219ENST00000509409 ALG10Q5BKT4 473 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 COQ5Q5HYK3 327 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 ARMC4Q5T2S8 1044 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 OR51F2Q8NH61 342 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 LIPHQ8WWY8 451 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 HDAC2Q92769 488 aaKnown RBP13.15□□□□□ -0.3
TPM3-219ENST00000509409 LRRC37BQ96QE4 947 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 TXNIPQ9H3M7 391 aa13.15□□□□□ -0.3
TPM3-219ENST00000509409 METTL17Q9H7H0 456 aaPredicted RBP13.15□□□□□ -0.3
TPM3-219ENST00000509409 IGLV3-9A0A075B6K5 115 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 FXYD1O00168 92 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 PIP5K1CO60331 668 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 MSMBP08118 114 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 NR2C1P13056 603 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 IFI30P13284 250 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 ANPEPP15144 967 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 ZNF32P17041 273 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 ITGA2P17301 1181 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 YAP1P46937 504 aaKnown RBP13.14□□□□□ -0.31
TPM3-219ENST00000509409 GDI2P50395 445 aaKnown RBP13.14□□□□□ -0.31
TPM3-219ENST00000509409 CTXN1P60606 82 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 FMODQ06828 376 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 ZNF718Q3SXZ3 478 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 SPATA46Q5T0L3 261 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 FAHD2BQ6P2I3 314 aaPredicted RBP13.14□□□□□ -0.31
TPM3-219ENST00000509409 SHQ1Q6PI26 577 aaKnown RBP13.14□□□□□ -0.31
TPM3-219ENST00000509409 UNQ6126/PRO20091Q6UXV3 157 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 CPEB3Q8NE35 698 aaKnown RBP13.14□□□□□ -0.31
TPM3-219ENST00000509409 OR2T12Q8NG77 320 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 AKR7LQ8NHP1 331 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 LZICQ8WZA0 190 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 BPIFA2Q96DR5 249 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 FAHD2AQ96GK7 314 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 RACGAP1Q9H0H5 632 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 SAR1AQ9NR31 198 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 NKIRAS2Q9NYR9 191 aa13.14□□□□□ -0.31
TPM3-219ENST00000509409 IGKV1D-43A0A0B4J1Z2 117 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 IGHV1-69-2A0A0G2JMI3 117 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 ELOVL7A1L3X0 281 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 GMNCA6NCL1 334 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 FAM220BPB1ANY3 271 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 RP2O75695 350 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 CRYBB2P43320 205 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 ZNF81P51508 661 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
TPM3-219ENST00000509409 RPL27P61353 136 aaKnown RBP13.13□□□□□ -0.31
TPM3-219ENST00000509409 LMO4P61968 165 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 ERVK-25P63136 954 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 SELENOWP63302 87 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 TAF11Q15544 211 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 THEM4Q5T1C6 240 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 SLC25A47Q6Q0C1 308 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 USP51Q70EK9 711 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 IGFN1Q86VF2 1251 aa13.13□□□□□ -0.31
TPM3-219ENST00000509409 MICU2Q8IYU8 434 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms