RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ITGB3BPQ13352 177 aaPredicted RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 GGTLC2Q14390 218 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 KCNJ11Q14654 390 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 TRAM2Q15035 370 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 SF3A2Q15428 464 aaKnown RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ZBTB6Q15916 424 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 C17orf58Q2M2W7 97 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 NDUFAF6Q330K2 333 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 NSUN5P1Q3KNT7 163 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 C14orf28Q4W4Y0 310 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 EOGTQ5NDL2 527 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 RSBN1Q5VWQ0 802 aaPredicted RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 TIGD3Q6B0B8 471 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 UFSP1Q6NVU6 142 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 C1orf94Q6P1W5 598 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 RFWD3Q6PCD5 774 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 REG3GQ6UW15 175 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 LCLAT1Q6UWP7 414 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ZNF546Q86UE3 836 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ZNF547Q8IVP9 402 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ZBED8Q8IZ13 594 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 PRR22Q8IZ63 422 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 MTURNQ8N3F0 131 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 LIX1Q8N485 282 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 KIF2BQ8N4N8 673 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 EID2Q8N6I1 236 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 CDRT4Q8N9R6 151 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 NOXO1Q8NFA2 376 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 OR2L8Q8NGY9 312 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 OR4Q3Q8NH05 313 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 UBA3Q8TBC4 463 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ZNF502Q8TBZ5 544 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ZNF564Q8TBZ8 553 aaPredicted RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 LGALS14Q8TCE9 139 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 TCTEX1D2Q8WW35 142 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 FGF11Q92914 225 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 SMARCD2Q92925 531 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 HSFY1Q96LI6 401 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 C9orf85Q96MD7 179 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 OR5B12Q96R08 314 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 SORT1Q99523 831 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 KLHDC3Q9BQ90 382 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 UQCC2Q9BRT2 126 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 UTP23Q9BRU9 249 aaKnown RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 MED10Q9BTT4 135 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 CCDC94Q9BW85 323 aaPredicted RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 PARD6GQ9BYG4 376 aaPredicted RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ULBP2Q9BZM5 246 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 WDR55Q9H6Y2 383 aaPredicted RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 MOB1AQ9H8S9 216 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 UCK1Q9HA47 277 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 ELL3Q9HB65 397 aaPredicted RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 PATZ1Q9HBE1 687 aaKnown RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 EML4Q9HC35 981 aaKnown RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 RMND1Q9NWS8 449 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 HRASLS2Q9NWW9 162 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 CCDC59Q9P031 241 aaKnown RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 SENP1Q9P0U3 644 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 HMGXB4Q9UGU5 601 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 DCDC2Q9UHG0 476 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 MUTYHQ9UIF7 546 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 MMP17Q9ULZ9 603 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 SPATA2Q9UM82 520 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 UBQLN1Q9UMX0 589 aaKnown RBP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 CBY1Q9Y3M2 126 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 PUS1Q9Y606 427 aaKnown RBP eCLIP1.55□□□□□ -2.16
XRCC4-204ENST00000509268 SAR1BQ9Y6B6 198 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 URGCP-MRPS24S4R325 110 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 V9GYY9 64 aa1.55□□□□□ -2.16
XRCC4-204ENST00000509268 AK9Q5TCS8 1911 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 FHOD3Q2V2M9 1422 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 HCFC1P51610 2035 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 KIR2DL5BA0A0G2JN68 375 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 KIR2DL5BA0A0G2JPC4 375 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 A0A1W2PRF3 423 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 A0A1W2PRM7 423 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 BCLAF3A2AJT9 711 aaKnown RBP1.54□□□□□ -2.16
XRCC4-204ENST00000509268 PSMB11A5LHX3 300 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 USP27XA6NNY8 438 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 FAM220BPB1ANY3 271 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 SRRM5B3KS81 715 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 B4DXG7 233 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 E7EWF7 191 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 LOC110117498-PIK3R3F6TDL0 507 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 KLRC4-KLRK1H3BQV0 150 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 CDC7O00311 574 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 PRMT5O14744 637 aaPredicted RBP1.54□□□□□ -2.16
XRCC4-204ENST00000509268 MRPS12O15235 138 aaKnown RBP1.54□□□□□ -2.16
XRCC4-204ENST00000509268 ZW10O43264 779 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 EMC8O43402 210 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 UGT1A9O60656 530 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 MPDU1O75352 247 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 ADAP1O75689 374 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 ZMPSTE24O75844 475 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 MYO1DO94832 1006 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 SEMA4FO95754 770 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 FADS2O95864 444 aaKnown RBP1.54□□□□□ -2.16
XRCC4-204ENST00000509268 ACTL6AO96019 429 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 HBE1P02100 147 aa1.54□□□□□ -2.16
XRCC4-204ENST00000509268 C2P06681 752 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms